Protein

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Genbank accession
YP_010078066.1 [GenBank]
Protein name
repeat-containing tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MDPISVSDVALDTIWESEIAWQIVRDVAMAVGKFVAGLVELDGADYADIGEVADDAAAMDLVSVDQRAMDAVSASAVAMEAVAASTIAMDAAIASEDIALPTIVETETAMNEVSLSDLALDSLWESDVAWGMIRDLSMAVGKFAVGRAGLSGYDYADIDDVASSQTAMDAVSTSETAMDAVSTSETAMDAVSTSETAMDAVSTSETAMDAVSASTLAMDAIWDSQLAWDTVAAVSMAVGKFVAARAGLEGSNYADIDAVASDQTAMDSVAASIIARTAAISSAYTYDTIWSTDLASGTIWDTGDFANDPTNSGWWSQSFDLSNSSTFSVYTRADNGSPDLKIKIGGSEVFGTDSDHSSWTERSFDVSSYSGETTIELGLEGYDNSPDDYISDRYNGRSGGESLYIRMETLGSVGSSSEYAEFSDMKLE
Physico‐chemical
properties
protein length:428 AA
molecular weight: 44918,48050 Da
isoelectric point:4,05003
aromaticity:0,07710
hydropathy:0,01472

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Natrialba phage PhiCh1
[NCBI] 		114777 Uroviricota > Caudoviricetes > Vertoviridae > Myohalovirus alkaliphilum > Myohalovirus phiCh1
Host Natrialba magadii ATCC 43099
[NCBI] 		547559 Methanobacteriota > Halobacteria > Halobacteriales > Natrialbaceae > Natrialba > Natrialba magadii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010078066.1 [NCBI]
Genbank nucleotide accession
NC_054954.1 [NCBI]
CDS location
range 25919 -> 27205
strand -
CDS
ATGGATCCGATCAGCGTGTCCGACGTCGCGTTGGATACGATCTGGGAGAGCGAAATCGCTTGGCAGATCGTCCGAGACGTCGCGATGGCGGTCGGAAAGTTCGTTGCTGGACTGGTCGAACTCGACGGGGCGGACTACGCCGATATCGGCGAAGTCGCAGACGACGCGGCCGCGATGGATCTGGTCTCTGTCGACCAGCGGGCAATGGATGCGGTGAGCGCGTCCGCCGTCGCGATGGAGGCAGTCGCCGCCTCCACTATCGCGATGGATGCCGCGATCGCCTCGGAGGACATCGCGCTACCGACAATCGTCGAAACTGAGACGGCCATGAACGAGGTCAGTCTCTCCGATCTCGCGCTCGATTCGCTCTGGGAGAGCGACGTTGCGTGGGGGATGATCCGCGACCTCTCGATGGCCGTCGGGAAGTTCGCTGTGGGCCGAGCGGGCCTCAGCGGCTATGACTACGCCGATATCGACGATGTCGCCTCCTCTCAGACCGCGATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTGCCTCCACCCTCGCGATGGATGCGATCTGGGATTCGCAGCTTGCCTGGGACACCGTTGCTGCCGTCTCGATGGCGGTCGGGAAGTTTGTAGCCGCCAGAGCGGGCCTGGAGGGCTCGAATTACGCCGATATCGATGCCGTCGCGTCTGACCAGACGGCGATGGATTCGGTTGCGGCGTCCATCATCGCAAGAACCGCTGCGATTTCCAGTGCGTACACGTACGACACGATCTGGTCGACAGACCTCGCGAGCGGCACCATCTGGGACACGGGCGACTTCGCGAACGACCCGACGAACAGCGGTTGGTGGAGCCAGTCGTTCGATCTCTCGAACAGCAGCACCTTCAGCGTCTACACGAGGGCGGACAACGGATCGCCTGATCTGAAAATTAAGATCGGTGGATCGGAGGTATTCGGCACAGACAGCGACCACTCCTCTTGGACTGAGCGGAGCTTTGACGTCTCCTCGTACAGCGGTGAGACGACGATCGAGCTCGGGCTCGAAGGCTACGACAACAGTCCGGATGACTATATCTCGGACCGGTACAACGGTCGTTCAGGCGGCGAATCTCTTTACATCCGAATGGAAACGCTCGGCAGCGTTGGTAGTTCGTCTGAATATGCCGAGTTCAGCGACATGAAACTCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8afe81c9fdb23e37b1878e23256a9c512b521e93618efdce3845a85c889f5a2d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7735
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Halobacterium salinarum virus ChaoS9, a Novel Halovirus Related to PhiH1 and PhiCh1 Dyall-Smith,M., Palm,P., Wanner,G., Witte,A., Oesterhelt,D. and Pfeiffer,F. 2019 — GenBank