Protein

View in Explore
Genbank accession
WCZ56632.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MAAGTLSVTNNSKAVVGVGTTFTAFTAGDFLSLVVGQIPYTVAIASVESDTELTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMIADENNWRAIFGDAEEITVTLPNGQVMQGMSWGYLSQLLKEVDPVEMRNLQQQAAASEAAAQGFRNEAEGFKTETAGIRDATNQIKADTQAIHDATNTIKTQTDQIKADTQAIKDQTNQIKTDTGAIRDEANAAKAEAQAASTAAQGFRDQAEEWAQSVNPDNLLTKSGNLAGLADKSASWANLMPSGPLRVGADPVDPLDSATKGWVSRGLDDVGLWGLRNNNASGLADGAEVYGGRFDSSATVAGAEKYRTSIQLQGRNNVDIWTRLATVHALAPATSPSWDFKYDGKIIFNKALGPSSISASPGNTYLTLANTWMDSQYSGHVGFVGGGTGTAGGGWRNFISFGALIHPVAGSSHPHAMISQVFDYDLASGTQPNPDITRNTTFNAESYDITFGNNAGSVNYIFAKSPVSDRALKHDIARIDTQVAYDNVMTMEYSSFVYNYDKKETVRRGFIAQQLEEIDPQYVRKYADATGKEFLALDENVLLLDLIATVQHLAAKVEALESKLAEK
Physico‐chemical
properties
protein length:607 AA
molecular weight: 65012,56820 Da
isoelectric point:4,85231
aromaticity:0,07908
hydropathy:-0,26293

Domains

Domains [InterPro]
DC_0162
STR
1–607
DC_0162
G3DSA:1.10.287.950
STR
135–266
G3DSA:1.10.287.950 IPR030392 Coil
Coil
Unmapped
142–162
Coil IPR030392
WCZ56632.1
1 607
Architecture
STR
STR 1-607
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K19
[NCBI] 		3027607 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56632.1 [NCBI]
Genbank nucleotide accession
OQ291023.1 [NCBI]
CDS location
range 21991 -> 23814
strand +
CDS
ATGGCAGCGGGTACACTATCCGTAACGAATAACAGCAAGGCGGTTGTCGGGGTAGGCACGACGTTTACCGCGTTTACAGCTGGCGACTTCTTATCGCTGGTAGTGGGGCAAATCCCATACACTGTTGCTATTGCGTCAGTCGAAAGCGACACCGAGCTTACGCTGGTGTTGCCGTTCGATGGCCCCACGGCAACGGGACTCGCGTGGGATGGCGTTAAGCGCGATACCATGTCGCTGGCAACGATGGGCGTAACCGTCCAGGCACAGAAAGCGTTGCGCTTGATGATCGCGGACGAAAACAACTGGCGTGCAATCTTCGGTGACGCTGAGGAAATCACGGTAACGCTGCCGAACGGGCAAGTTATGCAGGGTATGTCGTGGGGCTATCTGTCGCAATTGCTGAAGGAAGTTGACCCCGTTGAAATGCGCAACCTGCAACAACAAGCCGCGGCATCTGAAGCAGCAGCGCAAGGATTTCGCAATGAGGCCGAAGGCTTCAAGACTGAGACGGCTGGGATTCGCGACGCCACCAACCAGATTAAGGCTGATACGCAGGCGATCCACGACGCCACTAATACCATCAAAACGCAGACTGATCAGATTAAGGCTGATACGCAGGCGATCAAAGACCAGACTAACCAGATCAAGACTGACACCGGCGCTATTCGCGACGAGGCCAACGCCGCGAAGGCTGAAGCGCAAGCCGCCAGCACTGCCGCGCAGGGATTTCGCGATCAGGCCGAAGAATGGGCGCAAAGCGTAAACCCCGACAATCTGCTAACCAAATCCGGCAACCTCGCCGGGCTTGCGGACAAAAGTGCGTCGTGGGCTAACCTTATGCCGTCAGGACCGCTTCGCGTAGGCGCGGATCCAGTCGACCCTCTTGACTCTGCGACTAAAGGGTGGGTGTCGCGCGGTCTTGATGACGTGGGACTATGGGGTTTACGCAATAACAACGCGTCAGGCCTGGCGGATGGCGCAGAAGTATACGGCGGTCGATTCGATTCATCTGCGACCGTTGCCGGGGCCGAAAAATACAGAACGTCGATTCAGCTTCAGGGCCGTAATAACGTGGACATCTGGACCCGTTTGGCAACCGTTCACGCCCTCGCCCCGGCGACCTCGCCGTCGTGGGACTTTAAATATGATGGCAAGATCATTTTTAATAAAGCATTGGGGCCATCGTCCATTTCTGCGTCGCCTGGTAATACCTACTTGACCCTTGCGAATACATGGATGGACAGCCAGTACTCTGGCCACGTAGGATTTGTCGGTGGCGGCACGGGCACGGCGGGTGGTGGGTGGCGTAACTTCATTTCGTTCGGGGCGTTGATTCACCCCGTTGCGGGGTCATCACACCCTCACGCTATGATTTCGCAGGTCTTTGACTATGATCTGGCGTCAGGAACACAGCCTAACCCCGATATCACTCGGAATACTACCTTTAACGCTGAGTCATACGACATTACCTTCGGCAACAACGCCGGGTCTGTTAACTATATTTTCGCAAAGTCCCCAGTATCCGACAGGGCGCTGAAGCATGATATCGCCCGGATCGATACTCAAGTTGCGTACGATAACGTTATGACTATGGAATACTCTTCCTTTGTTTATAACTACGACAAAAAGGAAACGGTAAGACGTGGTTTTATCGCGCAGCAGTTGGAAGAGATCGACCCGCAGTATGTTCGTAAATACGCCGACGCAACGGGTAAAGAGTTTCTGGCATTAGATGAAAACGTCCTGTTACTTGACCTCATCGCTACTGTTCAGCATTTGGCGGCGAAGGTTGAGGCGTTAGAAAGTAAGTTAGCGGAGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d347cf469a4a8bf548b9bf6ed45fdbcadc4de4f43232603d8c056a4b0d432ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7065
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K19 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank