Protein

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Genbank accession
AUR90141.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MTVETIVSAPLGVAGEYPSHDNKLGLGGVHVFTNIKERDLMWATLKDKNTVALVGSGENNYPSWYKWESGKWHFSGYFGGMVLADVDGALTHVDSTAVLGADFEIQSAGDTGKGVLLMLSAAVKAEIAKKAGAGAITIRSQKDTIAGVGQLTIAEGLELVPDKDDKTKALIRVDPAFFFAGKPSAYLAGLKKNIAITALNPDGVIFFDKPMTQAGEGIEVNKGSYGIQDPTMDDPNVTGGTPTEILSTIGFIGNAPESGRIMFSVKVKRMGESEKFLTNPNGKVIVYEREVTLGQKLKPMFLAGIVQAKGVEYIRLHVSHNFKASELVIDHTKSFLCFQQLVNGWQSSVARNAFEQKAGVVFTPEIERFGADIISAADELKTDTAMISGSAGDSFEDLDLLGFNTLAPVSAGIVNGNFTATSSGSDIADFMLDMAADNYNTKLLRGHNVTFDIELVDKNSGWNFDLYAWTGEADKPTQLYGSRNNQAINVNANLTKIATTFISEDIVSGAHRASVSGVIPDDANNIIAVVYPVEAQNPLTLKVASMAMSSDPFTAYAETMPELASERHLHLSESYARFIQNTQGFAALRYTYNAKEQPAPTGKQFRGNAPITIDSSINSIAGSQAKGGEGAYKFGFDGIVEVSTSVSASNETNSDTTMSLFFRSVDIDGALGGEIPDSKVTFTVKAGDKNIEHSLPAFEITVQEGYRVAPRITESAKDGGYLECDSDRQPLIETTFDIKKLI
Physico‐chemical
properties
protein length:742 AA
molecular weight: 79655,74000 Da
isoelectric point:4,97275
aromaticity:0,08491
hydropathy:-0,13733

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR90141.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,9612
Central domain 201 399 200 0,2689
C-terminal 400 742 342 0,9416
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-399
C-terminal
400-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.138.O._10N.261.48.A1
[NCBI] 		1881336 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90141.1 [NCBI]
Genbank nucleotide accession
MG592509.1 [NCBI]
CDS location
range 19669 -> 21897
strand +
CDS
ATGACAGTAGAAACGATTGTAAGCGCGCCGCTTGGCGTTGCAGGAGAGTATCCAAGCCATGACAACAAACTAGGGCTTGGTGGGGTTCATGTGTTTACCAACATTAAAGAGCGCGATCTGATGTGGGCGACACTAAAAGACAAAAACACGGTGGCGCTAGTTGGTAGTGGTGAAAACAATTACCCGTCTTGGTATAAATGGGAGTCTGGAAAGTGGCACTTTTCGGGATACTTTGGTGGCATGGTACTAGCTGATGTTGATGGAGCGCTAACGCACGTCGATAGTACCGCCGTGCTTGGTGCTGATTTTGAAATACAAAGCGCGGGCGATACTGGTAAGGGTGTTTTGTTGATGCTAAGCGCAGCGGTTAAGGCTGAAATTGCAAAGAAAGCGGGCGCGGGTGCGATAACCATAAGGTCACAAAAAGACACAATAGCCGGAGTTGGTCAACTGACCATTGCGGAGGGTTTGGAGCTAGTGCCAGATAAGGATGACAAAACCAAGGCGCTGATTCGCGTTGATCCTGCTTTCTTCTTTGCGGGTAAGCCTAGCGCGTACTTAGCAGGGCTAAAGAAAAACATTGCAATAACCGCACTTAATCCTGATGGCGTTATATTTTTTGATAAACCAATGACGCAAGCGGGTGAGGGGATTGAGGTAAATAAAGGCAGCTACGGAATACAAGACCCAACAATGGACGATCCCAACGTTACTGGCGGGACGCCTACGGAAATCCTATCAACAATAGGCTTTATCGGTAATGCACCGGAAAGCGGGCGCATTATGTTTTCTGTGAAAGTAAAGCGCATGGGGGAGAGTGAGAAGTTTCTAACCAATCCCAACGGAAAGGTAATTGTTTATGAGCGAGAAGTGACGCTGGGGCAAAAGCTAAAGCCAATGTTTCTAGCTGGTATCGTTCAGGCAAAAGGCGTTGAGTACATTCGTTTGCATGTATCGCACAACTTCAAAGCCTCAGAGCTTGTGATCGACCACACAAAATCATTCTTGTGTTTCCAGCAATTAGTAAACGGGTGGCAATCGTCAGTTGCTCGAAATGCATTTGAACAAAAAGCGGGCGTTGTTTTTACTCCAGAGATTGAGCGCTTTGGTGCGGATATCATAAGCGCGGCGGATGAACTGAAAACAGACACAGCAATGATTAGCGGAAGTGCTGGCGATAGCTTTGAAGATTTGGATTTGTTGGGATTTAACACGCTGGCACCAGTAAGCGCTGGTATCGTTAACGGTAACTTCACAGCCACTAGCAGCGGCTCAGATATCGCAGACTTTATGCTGGATATGGCGGCGGACAATTACAATACAAAATTGTTGCGCGGTCATAATGTAACGTTTGATATCGAGCTGGTGGACAAAAACAGCGGTTGGAATTTTGACTTGTACGCATGGACTGGAGAGGCGGACAAGCCAACACAGCTTTATGGGAGCAGAAACAACCAAGCTATAAACGTAAATGCAAACCTCACCAAGATAGCAACTACGTTCATTAGTGAGGATATTGTTAGCGGTGCTCACAGGGCCAGTGTGAGTGGAGTTATTCCTGATGATGCAAATAACATTATTGCGGTGGTCTACCCAGTCGAAGCTCAAAACCCATTAACGCTAAAAGTTGCAAGTATGGCCATGAGTTCGGATCCGTTCACAGCATATGCAGAGACAATGCCAGAACTAGCAAGTGAGCGCCATTTGCACTTGAGTGAGTCATACGCGCGCTTTATCCAAAACACGCAAGGGTTTGCAGCATTGCGCTATACATACAACGCAAAAGAGCAGCCAGCGCCGACAGGCAAGCAATTTAGAGGTAATGCACCGATTACCATTGATTCGTCAATAAATTCAATAGCAGGAAGCCAAGCAAAGGGCGGTGAGGGTGCTTACAAGTTTGGGTTTGATGGAATTGTAGAGGTATCAACTAGCGTTAGTGCTTCAAATGAAACTAATTCAGACACTACAATGTCACTGTTTTTTAGAAGCGTTGATATTGATGGGGCTTTAGGGGGTGAAATTCCAGATAGTAAAGTCACATTCACAGTAAAGGCGGGGGATAAAAATATTGAACATTCACTGCCAGCATTCGAAATTACAGTGCAAGAGGGGTACAGAGTTGCACCGCGCATCACCGAAAGTGCGAAAGATGGCGGTTATCTGGAGTGTGACAGCGACAGGCAGCCACTAATCGAAACAACGTTTGATATTAAAAAGCTAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2dbc2ba5159fbe962b45b4a59e9f078927f99d3047cd3a56132fcfd4197686c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank