Protein

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Genbank accession
WYM31517.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVSTAWGRPVQGISQQPDRVRQEGQCTQQINGIPDVVKGLTKRPSTEFIKAIMQSGVSSNSAFHSYDRGDEQYFMFIQPNTSLIKVFDVNGVEQVVNHTHGDYLNNARPDLNLDFTTVADYTFITNRTVPVTMTSDKSPQLTRMGIVYSQYATYGKTYAILADGVVIASYETPDGSDASHINNVATDYIANQLYLDIAGDPSVPTSPNPNYNASLHNNVLWIQRNDGADFKLTTSDSQKGEDLIAAKGSVRTTTQLPPIAPDGYTLRITGAGKSSKDDYWLKAVNSNESSIKWVETVEPNIPIRFNNNTMPHVLVRESVSSGGIATFSFRQGEYEDRQVGGTDSNPLPSFIDEDNPAVIQATGVFQNRLFFLSGESFVTSRSNLFFNFWRETTQTAAATDPLEGYADTDRVNNLYNYEILNGDLAIFSDNAQFVIDGSRPITKDNLTLRQVTAYPSEVTVGPQAAGENVFFAYNAAGYVGVRELFTDNYSDTKKAYPITDYVSKFIPGRCKQILASPNLNTMIIRTFDDLTKLFIYDWLWQDNQKVQSAWHYWQMDGDVLYVFYIQDILYVVYRIGSITYLDSLRMLNDPETTGLPYSTKLDHKYTSIATYNPLTGKYNFSVPYDRSDVVSTLSDGCYEEDRGSSFSPTYLGNGNWETVEDLSPDKRDVNIISGVKYRFSYIPTQPVVKDFRERVIGLSSIIMSNLFIHYEITGDIYVTASPKNGQVRDYHFSGRYMGTAENTVGSPILDNGTYRVPIRQRAEDMTIEIWSDTHYPLTIRDMEMDGSFHQRGQRI
Physico‐chemical
properties
protein length:797 AA
molecular weight: 89642,65550 Da
isoelectric point:4,92938
aromaticity:0,11669
hydropathy:-0,41556

Domains

Domains [InterPro]
IPR058003
TTP
1–797
IPR058003
WYM31517.1
1 797
Architecture
TTP
TTP 1-797
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYM31517.1
1 797
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9938
Central domain 141 339 200 0,1143
C-terminal 340 797 457 0,0940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-797

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage VL73
[NCBI] 		3136638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYM31517.1 [NCBI]
Genbank nucleotide accession
PP556867 [NCBI]
CDS location
range 23097 -> 25490
strand +
CDS
ATGGCTTATGTAAGTACCGCTTGGGGTAGACCTGTACAAGGTATATCACAGCAACCTGACCGGGTTAGGCAAGAGGGCCAGTGTACTCAGCAGATTAATGGTATACCCGATGTAGTTAAGGGGTTGACCAAGCGACCATCTACTGAGTTCATCAAAGCTATAATGCAATCTGGTGTATCTAGTAATTCAGCATTCCATAGCTATGATAGGGGTGATGAGCAGTATTTTATGTTTATCCAGCCTAACACTAGCTTAATTAAAGTATTCGATGTTAATGGTGTTGAGCAGGTAGTTAATCATACTCATGGTGATTATCTTAATAACGCAAGACCAGATTTGAACCTAGACTTCACAACTGTTGCAGATTACACCTTTATTACAAACAGGACAGTTCCTGTAACTATGACTTCTGATAAGTCACCGCAGCTTACCAGAATGGGTATTGTATATAGCCAATATGCAACTTATGGTAAGACTTATGCAATACTAGCTGATGGGGTTGTTATCGCATCTTATGAGACACCAGATGGCAGTGATGCAAGCCACATCAATAACGTAGCAACTGACTATATAGCTAATCAACTTTACCTTGATATTGCTGGTGACCCATCAGTGCCTACGTCACCTAATCCAAATTATAATGCATCGTTGCATAATAACGTTCTTTGGATTCAGCGTAATGATGGTGCTGACTTTAAGCTAACCACATCAGACTCCCAGAAGGGCGAGGACTTGATAGCAGCTAAGGGTTCTGTTAGGACAACTACACAGTTGCCACCAATAGCCCCAGATGGATACACACTTAGAATTACTGGGGCTGGTAAGTCAAGCAAAGATGACTATTGGCTAAAAGCTGTTAACAGTAATGAATCATCAATTAAGTGGGTAGAGACTGTAGAGCCTAATATACCTATCCGTTTTAATAACAACACCATGCCACACGTTCTAGTGAGGGAGAGTGTCTCTAGTGGAGGTATCGCAACATTCTCATTCCGTCAAGGTGAGTATGAGGATAGGCAGGTTGGCGGAACAGACAGCAACCCATTGCCATCATTTATTGATGAAGATAACCCCGCCGTTATTCAGGCTACTGGTGTATTCCAAAATAGGCTATTCTTCCTTAGTGGTGAATCATTTGTCACATCTCGCTCTAATCTATTCTTTAACTTCTGGAGAGAAACAACCCAGACAGCAGCAGCCACTGACCCATTAGAGGGATATGCTGATACTGATAGGGTTAACAATCTTTACAACTATGAGATACTTAATGGCGACCTAGCCATATTCTCTGATAATGCACAGTTTGTTATTGATGGTAGTAGACCTATTACCAAAGATAACCTGACGCTAAGGCAAGTTACTGCATACCCTAGTGAGGTTACTGTAGGTCCACAAGCTGCTGGTGAGAATGTATTCTTTGCATATAACGCTGCTGGTTATGTTGGTGTACGAGAGCTGTTTACTGACAACTACTCTGATACTAAGAAAGCTTATCCAATAACTGATTATGTGAGTAAGTTCATTCCCGGTAGGTGTAAGCAGATACTTGCATCACCTAATCTTAATACCATGATTATCAGAACATTTGATGACCTTACCAAGTTGTTTATTTATGATTGGTTATGGCAGGATAATCAGAAGGTACAAAGTGCTTGGCACTATTGGCAGATGGATGGTGATGTACTCTATGTATTCTACATCCAAGATATTCTTTATGTTGTTTACCGTATAGGCTCTATTACTTATTTAGATTCCCTGAGAATGCTAAATGATCCAGAGACTACTGGACTTCCGTACTCTACTAAGTTAGATCACAAGTACACCTCTATAGCTACTTATAATCCACTGACAGGTAAATATAACTTCTCCGTACCTTATGACCGGAGTGATGTAGTTAGTACATTATCTGATGGGTGCTATGAAGAAGATAGGGGAAGTAGCTTTAGTCCTACATACCTTGGTAATGGTAATTGGGAGACTGTGGAAGACTTAAGCCCTGACAAGAGGGATGTTAATATCATCAGTGGTGTTAAGTATAGATTCTCTTACATACCAACACAGCCTGTTGTAAAGGACTTCCGTGAGAGGGTGATAGGTCTTAGTAGTATAATCATGAGTAACCTGTTTATTCATTATGAAATAACTGGTGATATTTATGTAACAGCCTCGCCTAAGAATGGGCAGGTGAGGGATTATCACTTTAGTGGCAGGTACATGGGTACAGCTGAGAATACTGTAGGCTCACCAATTCTTGATAACGGCACTTATAGGGTTCCGATTCGTCAAAGAGCGGAGGATATGACTATAGAAATTTGGTCTGATACACACTACCCGTTAACCATCAGAGACATGGAGATGGACGGGTCGTTTCATCAACGTGGTCAGAGGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f35be18bb64cbd45816ca892bbae7118f97e489392cb5bb1402a167bb0a9fa0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank