Protein

View in Explore
Genbank accession
WMX18819.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATRPSSNALEGTIPSLLQGVSQQIPRERKPGQLGSQVNMLSDPVTGIRRRPAAKLLQDATGIPAPLTGKLFTAYVERGTDGRHLLIDTTNGNWWLLAKNTGSIVNRGNSPYLIASIGAVSIQTASVGGLTYILNTEQRPVTNINNGNKQNPANTGFARVLTGGFNKQWTLNVYANGTVYTSSFYQSQDDIAGSTAAAIAGKWRDGLQSQMPANSVFVQGSSIFVRGTNVSVETDAGTAYALTSGQSRVNQETDLPAVLPATADGALCAVGQAGADSTWYQYDYSKRSWIETGAYNSISSVTNVPLELAVDDNIIERPFEGRLSGDDETNADPYFITNGYFTGIAAFQGRLVLLSGAGITFSASGLYQRYYRSTVTSLLDTDRIDIAAASAQDSVFRTALQFNRDLTIFGDSMQAVVPGGGALTPTNASVTLTSEFSSDSRVVPIVAGQTILYPNRRNEGYAGVLEFLPSPYTASQYTTQDATAHLPRYIPGRIMKMVLSSVTNIGFIQYSGERNALLVHEYLWTGDGKAQAAWHKWTFKQEVLSVHSQSEVMYLFTRNPSSGEVQVQTIDPREGFVADGLYEVPYLDARTLMSVQGGQFTVPAHLRGSDYMQDLALAYPETSGLAGDNVGILSYDGDTGKVVRGVPDGNYYIGFRIPSSFTITPPMIKDANDNLVGSGHVRLLRLDAAARKSGVFYVEVKDTARGVDNDNLYSGLLLNSRELAPDLAPRFELGNVIIPCRTNSDTTEVTFSTRDTLEMNILDISYILKYSPRRRRI
Physico‐chemical
properties
protein length:777 AA
molecular weight: 84251,29700 Da
isoelectric point:5,59275
aromaticity:0,09009
hydropathy:-0,21158

Domains

Domains [InterPro]
DC_0058
STR
1–777
DC_0058
IPR058003
TTP
9–777
IPR058003
WMX18819.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMX18819.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,9916
Central domain 151 349 200 0,0902
C-terminal 350 777 427 0,0755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-349
C-terminal
350-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_PAS7
[NCBI] 		3053875 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Cepavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMX18819.1 [NCBI]
Genbank nucleotide accession
OQ921331 [NCBI]
CDS location
range 24971 -> 27304
strand +
CDS
ATGGCTACAAGACCTAGCTCTAACGCATTAGAAGGTACTATCCCTAGCTTACTGCAAGGGGTCTCTCAGCAGATTCCACGTGAGCGTAAGCCCGGTCAGTTAGGTTCTCAAGTGAACATGCTATCTGACCCCGTTACCGGTATCCGTCGAAGACCTGCTGCTAAGCTGCTTCAGGACGCTACAGGTATTCCAGCGCCATTAACAGGTAAGCTATTTACTGCTTACGTAGAGCGTGGTACTGACGGCAGACATCTACTGATTGACACTACTAACGGTAACTGGTGGCTTCTGGCTAAGAATACCGGCAGCATAGTTAACCGTGGTAATAGTCCGTATCTGATTGCTAGTATAGGCGCGGTATCCATTCAGACTGCCAGTGTAGGTGGGTTAACTTACATCCTTAATACCGAGCAGAGGCCTGTTACTAACATTAATAATGGCAATAAACAGAACCCCGCTAACACAGGCTTTGCCAGAGTACTGACAGGTGGCTTTAATAAACAGTGGACTCTTAATGTATACGCTAATGGAACTGTTTACACCAGCAGCTTCTATCAGAGTCAGGATGATATAGCAGGTTCCACTGCTGCTGCTATAGCTGGTAAGTGGCGTGATGGGTTACAATCTCAGATGCCAGCAAACTCAGTGTTTGTGCAGGGTAGTTCTATATTCGTTAGAGGTACGAACGTATCTGTAGAGACTGATGCAGGTACTGCATATGCACTTACTTCTGGACAGTCTCGGGTAAATCAGGAAACTGACCTACCAGCAGTACTACCAGCAACAGCAGACGGTGCACTATGCGCAGTAGGTCAAGCAGGGGCAGATAGTACTTGGTATCAGTACGATTACTCTAAACGTAGCTGGATTGAGACTGGTGCTTATAATAGCATAAGCAGCGTTACTAACGTACCTTTAGAATTGGCAGTAGATGATAATATTATCGAACGCCCTTTCGAAGGTAGGCTCTCAGGAGATGACGAAACTAACGCAGACCCTTACTTCATTACCAACGGTTACTTCACAGGTATTGCGGCATTTCAAGGGCGGCTAGTACTACTGTCTGGTGCAGGTATTACATTCTCAGCGTCAGGCCTGTATCAGCGCTACTATCGAAGCACAGTAACCTCACTGTTGGATACTGACCGTATAGATATTGCGGCAGCATCTGCGCAGGACTCTGTGTTCCGCACAGCCTTACAGTTCAACCGAGATTTAACTATCTTTGGTGACAGTATGCAGGCAGTAGTACCGGGCGGTGGTGCGTTAACCCCTACAAACGCAAGCGTAACATTAACGTCAGAGTTCTCGAGTGACAGTCGGGTTGTGCCAATTGTCGCAGGTCAGACTATCCTCTACCCGAACCGTAGGAACGAAGGTTATGCAGGAGTGCTTGAGTTCTTGCCAAGTCCTTACACTGCCAGTCAGTACACTACGCAGGATGCTACTGCGCACCTGCCCCGTTATATACCGGGCCGTATCATGAAGATGGTACTTAGCTCCGTAACTAACATAGGATTTATTCAGTACAGCGGTGAGCGTAACGCACTGCTTGTGCACGAGTATCTCTGGACGGGTGATGGCAAGGCGCAGGCTGCTTGGCATAAGTGGACGTTCAAACAAGAAGTACTGAGCGTGCATAGTCAATCAGAAGTAATGTACTTGTTTACACGTAACCCTAGCTCAGGTGAAGTACAGGTCCAGACTATTGACCCCCGCGAAGGGTTTGTAGCTGATGGCTTGTACGAAGTTCCATACCTAGATGCGCGTACCTTAATGAGCGTACAAGGCGGTCAGTTCACAGTTCCAGCGCATTTACGCGGCTCTGATTACATGCAAGACCTTGCGTTAGCATATCCAGAGACTAGTGGATTAGCAGGTGATAATGTTGGCATTCTATCCTATGACGGAGATACAGGTAAGGTAGTAAGAGGTGTTCCAGATGGTAACTATTATATAGGCTTCCGTATTCCGAGCAGCTTTACTATTACCCCGCCTATGATAAAGGACGCTAACGATAACTTGGTAGGTTCTGGGCATGTACGCCTGTTGCGTCTAGATGCAGCTGCGCGTAAGTCCGGTGTATTCTATGTAGAGGTCAAGGACACTGCCAGAGGTGTAGATAATGATAATCTATACTCAGGGCTGTTACTGAACTCACGAGAACTTGCGCCTGACCTAGCTCCTAGATTTGAACTAGGTAACGTTATAATCCCTTGCAGGACTAACTCCGATACTACTGAGGTTACTTTCAGTACTCGAGATACGTTAGAAATGAACATACTGGATATCTCGTATATCCTTAAATACAGTCCACGTCGTAGACGTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6aa42e2f6283baaf5b34d6dff406d57e072c549804432a4a677f270f40a15db
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of three non-O157 smooth Escherichia coli infecting phages Pas,C., Briers,Y. and Fieseler,L. 2024-10-30 — GenBank