Protein

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Genbank accession
XRA13964.1 [GenBank]
Protein name
BppU family baseplate upper protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MPMNKIAKTELDVNAYYKSIKNMNVEFYNQDIGTAKFEFQITRNNAPMPLSEINVDSYIAIVTSNGEKKIDNLVFEDELNGIVSYTLPDDVLYHVGKTLGEVYISQKGTGDTVVVRTFEFSIKDAVINTISGDTKLSYIRRFDDLLKIVNYRVVAMEESLANLEDYVTKVNNATNDGIAKIGVKESQVLLAIQNEKNEIIELLTDNAYLKVNEFETYKQNIDTQMSAFNNTVEEKTKNKVTEEELTTKLNSLKNELLDYTDKKKDAKVIPLTLVNGTELISGGVDSKDNITLTYFSIGSGYLYCQLSGWVKSEATGTISQIPENLKIVAEWTGGAAWDVPLRSASSITARIYVRKDNLIRLIKNDNFDYPYSLDPISFIAKEVE
Physico‐chemical
properties
protein length:384 AA
molecular weight: 43205,39490 Da
isoelectric point:4,82588
aromaticity:0,08854
hydropathy:-0,29141

Domains

Domains [InterPro]
DC_1215
STR
1–373
DC_1215
G3DSA:2.60.40.3350
ATT
7–129
G3DSA:2.60.40.3350 Coil Coil
IPR018913
ATT
8–150
IPR018913
XRA13964.1
1 384
Architecture
ATT
STR
ATT 1-150 | STR 151-373 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage HHU-22
[NCBI] 		3414726 Viruses > unclassified bacterial viruses >
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA13964.1 [NCBI]
Genbank nucleotide accession
PV454041 [NCBI]
CDS location
range 19862 -> 21016
strand -
CDS
ATGCCAATGAATAAAATTGCAAAAACGGAATTAGACGTGAACGCTTATTATAAAAGTATTAAAAATATGAATGTTGAATTTTACAATCAAGATATAGGAACAGCAAAATTTGAATTTCAAATAACACGTAATAATGCACCTATGCCTTTAAGTGAGATTAATGTGGATTCGTACATTGCAATTGTTACGTCTAATGGCGAGAAAAAAATTGATAATTTGGTTTTTGAAGATGAATTAAACGGTATTGTGAGTTACACGTTGCCTGACGATGTTTTATATCACGTTGGAAAAACATTAGGCGAGGTTTATATCTCGCAAAAAGGGACAGGTGACACAGTTGTTGTTAGAACTTTTGAATTTAGCATTAAAGATGCAGTAATTAATACTATTTCTGGAGATACAAAACTCTCTTATATTCGAAGATTTGACGACCTTTTAAAAATTGTTAATTATAGAGTGGTTGCTATGGAAGAATCATTAGCAAACCTAGAAGATTATGTAACTAAAGTCAACAATGCTACAAATGATGGTATAGCTAAGATTGGTGTAAAAGAAAGTCAAGTACTGTTAGCTATACAAAATGAAAAGAATGAAATTATAGAATTGTTAACAGATAATGCTTATTTGAAAGTAAATGAGTTTGAAACGTATAAACAAAATATAGATACTCAAATGAGCGCATTTAATAATACTGTAGAAGAAAAAACTAAGAACAAAGTTACTGAGGAAGAATTGACTACTAAATTAAATAGTTTAAAAAATGAGCTACTTGACTATACTGACAAGAAAAAGGATGCGAAAGTGATACCTTTAACATTAGTTAATGGTACTGAACTAATTAGTGGTGGAGTTGATTCTAAAGATAATATTACATTAACTTACTTCTCAATTGGGAGTGGATATTTGTATTGTCAATTAAGTGGTTGGGTAAAGTCTGAAGCAACTGGAACAATTTCTCAAATACCTGAAAATTTAAAAATTGTGGCAGAATGGACTGGTGGCGCTGCTTGGGATGTACCATTGCGTTCAGCTTCTTCTATTACAGCTAGAATTTATGTGAGAAAAGATAATTTGATTAGATTAATTAAGAATGATAATTTTGACTATCCTTATTCTCTTGATCCAATATCTTTCATAGCAAAGGAAGTGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a264bf2aaa0ca6af5ff8f678df2ca077dcc6120cc26e520938dc0f29b3916fc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50