Protein

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Genbank accession
XAV38153.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MINISAFGSICQFTASRTFPTGFTVTEFADDADPIDSPPFTAADTGVGLNGDMVVWNRANILEVVVNVIPNTEGERNLAVLLDANRTGKDKSGARDVVGLVVAMPDGSKITCTNGTPIDGVLINAVASVGRLKTKPYRFRFEKVIKAGTS
Physico‐chemical
properties
protein length:150 AA
molecular weight: 15876,90810 Da
isoelectric point:5,38341
aromaticity:0,06667
hydropathy:0,07000

Domains

Domains [InterPro]
IPR054440
STR
2–144
IPR054440
XAV38153.1
1 150
Architecture
STR
STR 2-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_RyC23_M4LORT
[NCBI] 		3148939 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAV38153.1 [NCBI]
Genbank nucleotide accession
PP781973.1 [NCBI]
CDS location
range 50777 -> 51229
strand +
CDS
ATGATCAACATTTCTGCGTTCGGCTCGATCTGCCAGTTCACGGCAAGCAGAACTTTCCCGACCGGATTCACCGTCACCGAGTTTGCCGACGATGCGGACCCCATCGACAGCCCGCCGTTCACTGCGGCCGATACCGGCGTCGGCCTCAACGGTGACATGGTAGTCTGGAACCGGGCGAACATCCTGGAAGTCGTCGTTAACGTCATTCCGAATACCGAGGGCGAGCGCAACCTGGCAGTCCTGCTGGATGCCAACCGCACCGGAAAGGACAAGTCGGGCGCTCGTGATGTCGTCGGCCTGGTCGTGGCGATGCCGGACGGCAGCAAAATCACCTGCACCAACGGCACCCCAATCGACGGCGTTCTGATCAACGCGGTGGCAAGCGTCGGCCGTCTGAAGACCAAGCCGTATCGGTTCCGATTTGAAAAAGTGATCAAAGCCGGTACTAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce0b310b77d5e087d3ae88c370095ebff3192144e811de0ddca23fb7fe3cdc14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6850
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Description of a lytic phage, vB_PaeM_RyC23_M4LORT, with activity against Pseudomonas aeruginosa high-risk clones Gonzalez de Aledo,M., Hernandez-Garcia,M., Maruri,A., Caballero,J.D. and Canton,R. 2023-01-03 — GenBank