Protein

Genbank accession
AJE28084.1 [GenBank]
Protein name
pectin lyase fold containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDFKKWQDPLMNSELQQDYNDNLVKLAGSLEKANQDMTHVNQRISNLVIKSGGNESNEVVDARVSSLVPETEFTTLNDRINYAENALITGVGKLSTNVYDLMDKYNDIDTILKRLYGLDSSNIEIFVDDARGDDIAGTGEIDAPFKTINKAVMTLPRVLNSNSVNIWIVPGRYNEDVVIPPIMGGDIYIRSTNFETVDPTSSTGCQVRSISATGSNGYLYIAGLEETNTAGTTKNYFIKATRCGFVRITKCRMAFNTKAIDPFTAVFIDACSADVNGCYFASQNVDVRGYNTARVEVQNIVHGAKSAIGLYPQSADIFNLNSGTWEADTPTKLSGGGVVRT
Physico‐chemical
properties
protein length:341 AA
molecular weight: 37343,42300 Da
isoelectric point:4,83162
aromaticity:0,08211
hydropathy:-0,25132

Domains

Domains [InterPro]
Coil
30–50
Coil G3DSA:3.30.1910.20
IPR011050
124–301
IPR011050
AJE28084.1
1 341
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage vB_LmoS_293
[NCBI] 		1591073 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJE28084.1 [NCBI]
Genbank nucleotide accession
KP399678 [NCBI]
CDS location
range 16765 -> 17790
strand +
CDS
ATGGATTTTAAAAAATGGCAAGACCCACTAATGAACTCAGAACTACAGCAAGACTATAACGACAATTTAGTAAAACTAGCTGGAAGTCTTGAAAAAGCTAATCAAGATATGACGCATGTAAATCAACGTATATCTAACTTAGTTATTAAATCCGGCGGTAATGAATCGAATGAAGTAGTTGATGCGCGCGTTTCTTCTCTGGTTCCAGAAACTGAATTCACAACATTAAACGATAGAATAAATTACGCGGAAAATGCTTTAATAACAGGTGTCGGAAAGCTTTCAACGAATGTTTATGATTTAATGGATAAGTACAACGATATAGATACTATTTTAAAACGTTTATACGGCTTAGATAGCAGCAACATTGAAATATTTGTTGATGATGCTAGAGGCGATGATATTGCAGGAACTGGTGAAATTGATGCACCTTTTAAAACGATAAATAAAGCGGTAATGACTTTGCCTCGTGTGCTAAATAGTAACTCTGTGAATATCTGGATTGTTCCTGGTCGGTATAATGAAGATGTCGTTATTCCGCCAATCATGGGAGGGGACATCTACATTAGGTCTACAAACTTTGAAACAGTAGACCCTACCAGCAGTACCGGATGCCAAGTTCGAAGTATTTCTGCGACAGGAAGTAACGGCTATTTATATATTGCTGGTTTAGAAGAAACGAATACCGCAGGCACAACGAAAAACTACTTCATTAAAGCGACGCGATGCGGATTTGTAAGGATTACAAAATGCCGAATGGCCTTCAATACTAAGGCAATAGACCCGTTCACTGCGGTTTTTATTGATGCTTGTTCTGCTGATGTCAACGGCTGTTATTTTGCCTCACAAAATGTTGATGTTCGCGGTTATAACACTGCTAGAGTCGAGGTTCAGAATATCGTCCATGGCGCAAAAAGTGCGATTGGTTTGTATCCTCAAAGCGCCGATATTTTCAATCTCAATAGCGGGACTTGGGAAGCTGATACGCCTACGAAACTGAGCGGCGGGGGAGTTGTTAGAACATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3a5af10f517af7c88d9f6755fb46cdab048d019ed3a653d0be6b109ef69ae9d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8531
Evidence 0,8531
Download PDB

Literature

No literature entries available.