Protein

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Genbank accession
AUR86865.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNSNLIKQPYEIILDPTGGGGRAKPVANGKFYIGEIDKDPIANPRADIAYKDESGQERPLTSPLTLNNSGAFVVSKNDGTIIQPYMKDGIGFSVLIQDSRGRDVYSSESTGDPGNINEKIAELTDIAFKASGGKSAVENMVEGNPLRSNIGDICNADGSLWKMIKKSNPVVISDFTPISETRLDSFSDNSSPPSDDAFNLAQESGDKNTMLPEGDLTVSDLKFKTENKLIGQGRLKTEIHSTSGSVVSREQDKELQDGGLSHITVRGGGKDLADSVGIDLTRPSSEKKSALRNRFDNFTVREAEIGIKSNSGWNNVLTAYRVTDCDTGYKTESSWLSGWAGSGNVSISGYYSACNTGINTTSQWNMTFINTIVEHCKTPIFERGNSNTYINTWCESNDNPIKIMRGSVFINGRGLTFDLSEITEFEPEETLTLITNKGVMVARRDLNKPEFNVNGDGVTDLRTPTTGGEFSHYRTAFSGSGERTSIESVTYTGTTTPQAISEAVPIAAVKQVVTADGSSNLFGAVALWAGKAASDGIPDPTNPYEEKWRVRYDGGFRPSKGSAFDIGSSSNKVRDIYLENAPATTSDENLKTEIKTISDLVLDAWKNVRWGEFKLLDRIEEKGEDNARKHVGIGAQTVIRCFDEVGLNALEYSIVRIVYDKQDDELELNEDRTWHYEVVYTEALAMEAALMRRTTERLEKKLEELSK
Physico‐chemical
properties
protein length:707 AA
molecular weight: 77528,19880 Da
isoelectric point:4,92438
aromaticity:0,07496
hydropathy:-0,53253

Domains

Domains [InterPro]
IPR036730
ATT
2–113
IPR036730 IPR012334 IPR036388
IPR036730
ATT
23–103
IPR036730 IPR030392
IPR009093
ATT
24–75
IPR009093 IPR030392
DC_0783
STR
45–671
DC_0783
cd10144
CHP
586–693
cd10144
AUR86865.1
1 707
Architecture
ATT
STR
CHP
ATT 2-113 | STR 114-679 | CHP 680-705 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR86865.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,9827
Central domain 193 435 244 0,9759
C-terminal 436 707 271 0,9542
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-192
Central
193-435
C-terminal
436-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.090.B._10N.286.48.F1
[NCBI] 		1881319 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR86865.1 [NCBI]
Genbank nucleotide accession
MG592465.1 [NCBI]
CDS location
range 23603 -> 25726
strand +
CDS
ATGAATTCAAATCTAATTAAACAACCATACGAGATAATTCTCGACCCAACTGGCGGAGGTGGCAGAGCTAAACCTGTTGCTAACGGTAAGTTTTACATAGGTGAAATAGACAAGGACCCTATCGCAAATCCGCGTGCTGACATCGCCTATAAGGATGAGTCAGGCCAAGAGCGCCCGTTAACATCACCGCTAACTCTGAACAACTCAGGCGCGTTTGTAGTAAGTAAAAATGACGGAACCATCATTCAGCCGTACATGAAGGATGGGATTGGGTTTTCTGTGCTTATTCAGGATTCTCGCGGGCGAGATGTTTACTCTAGCGAGAGTACGGGAGACCCTGGTAATATAAACGAAAAAATAGCAGAGCTTACCGACATTGCTTTCAAAGCATCAGGTGGCAAATCTGCTGTTGAGAATATGGTTGAGGGGAACCCTTTAAGGTCAAACATTGGTGACATTTGTAACGCTGACGGTTCTTTGTGGAAGATGATAAAGAAGAGCAACCCGGTAGTTATAAGTGACTTCACTCCGATCAGTGAAACCAGACTTGATTCATTTTCCGACAACTCATCACCACCATCTGACGATGCTTTTAATTTGGCTCAAGAATCAGGTGATAAAAACACAATGCTACCTGAAGGTGATTTAACCGTTTCAGACCTTAAATTTAAAACAGAAAATAAATTAATAGGTCAAGGAAGATTGAAAACAGAAATACACAGCACTTCTGGTTCCGTTGTGTCGAGAGAGCAAGATAAGGAGCTTCAAGATGGCGGATTGTCTCATATCACAGTCAGGGGTGGCGGTAAAGACCTAGCTGACTCAGTTGGTATTGACCTAACTAGACCATCTTCTGAGAAAAAGAGTGCATTAAGAAATAGATTTGACAACTTTACAGTTAGAGAAGCAGAGATTGGAATTAAATCTAATAGCGGTTGGAATAATGTACTTACAGCTTACCGCGTGACAGATTGTGATACTGGATACAAGACAGAATCTTCATGGCTATCTGGATGGGCTGGTTCTGGTAACGTATCAATTTCAGGCTACTATTCTGCCTGTAATACTGGCATAAACACCACATCTCAGTGGAATATGACATTCATCAACACTATTGTTGAGCATTGTAAGACCCCTATTTTTGAGCGAGGCAATAGCAATACATACATAAACACATGGTGCGAGAGCAACGATAACCCTATAAAAATAATGCGCGGTAGTGTTTTCATAAATGGCCGAGGTCTGACTTTTGACTTGTCAGAAATTACCGAATTTGAGCCAGAAGAAACTCTGACTTTAATCACAAACAAAGGTGTGATGGTTGCCCGTAGAGATTTAAATAAGCCCGAGTTTAACGTTAATGGTGACGGTGTTACAGACCTAAGAACTCCCACTACTGGCGGTGAGTTTAGCCATTATAGAACCGCGTTCTCTGGCTCTGGCGAGCGAACAAGTATTGAGTCAGTTACATACACAGGCACAACAACACCGCAGGCGATAAGCGAAGCTGTCCCAATAGCAGCGGTAAAGCAGGTTGTAACTGCTGACGGCTCAAGCAATCTTTTCGGCGCTGTCGCATTGTGGGCTGGCAAAGCTGCATCCGATGGAATACCCGATCCAACAAACCCATATGAAGAAAAATGGCGAGTAAGATACGACGGCGGCTTTAGACCATCAAAAGGATCAGCTTTTGATATTGGTAGCTCTTCAAATAAAGTTAGAGACATTTATCTAGAAAATGCACCTGCAACAACTTCGGATGAGAACCTAAAAACAGAGATAAAAACTATTTCTGACTTGGTTTTAGATGCTTGGAAGAATGTTAGGTGGGGTGAGTTTAAATTATTAGACCGCATAGAGGAAAAAGGCGAAGATAACGCAAGAAAGCACGTGGGCATAGGAGCACAAACGGTTATTAGGTGCTTTGATGAGGTCGGGCTGAACGCTTTAGAGTATTCGATTGTAAGGATCGTTTATGACAAGCAGGATGACGAACTAGAGCTTAACGAAGATAGGACTTGGCATTACGAGGTGGTTTATACGGAGGCTTTAGCTATGGAAGCTGCATTAATGCGTAGAACAACCGAAAGACTTGAGAAGAAACTCGAAGAGTTAAGCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cedbc1edfa04a34147ade5ec4cb70d7b77da571fa445e2d1ce38e5efbf137fd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7204
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank