Protein

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Genbank accession
XYA29480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
LPSSALTDSNIDAWFTQRVLISARPGARRINLGVVKNTDNSFDVYLHAPAGWIPELWLNRVNVQANNGSITGPIIDRTGYSWITTEPAGIVYNSPSDYLMANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGAVVRANNNNAIVYSIPEDGQGMYFRPNGDMNSAKQVVFDAANFTVTGLNATFSNAVTMLSTLRVNGSSNLRGGVDVTASQKLPLKETTATTGIGVNFIGDNATECSFGIENTAGGSAVFHNYARGASNSATKNNQLLGGYGSRPWLGSAYTAHSNAALHFLGAGDASDTNHGGWIRLLVTPKGKNIGWRSPVMRISDNGDTWLVTAGSMVSPDLDEVRSFETLNAAVPKFNAPTNQDGRGLKIVADGAPEINMIAPRGSNASSPAVRAMWCDGSLGNSDKYIGATQAWSNFFFGASGHDGEKFDSMRGAVNIQAPKGWGATSTPTRILFETCATGSTTRTSRWCVDHNGNFIPMGDGGYDIGWGSGRVNNIYAKNGAINTSDGRMKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEQTVVSEYGPANEDGSENPIYKTIPAGDRYSFRIDELNMFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:647 AA
molecular weight: 69582,63840 Da
isoelectric point:5,44969
aromaticity:0,09119
hydropathy:-0,33122

Domains

Domains [InterPro]
DC_2180
STR
105–240
DC_2180 DC_0783
IPR036388
RBD
501–646
IPR036388
IPR030392
CHP
515–645
IPR030392
IPR030392
CHP
515–574
IPR030392
cd10144
CHP
515–637
cd10144
XYA29480.1
1 647
Architecture
STR
STR
RBD
STR 105-240 | STR 265-599 | RBD 600-646 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29480.1
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0749
Central domain 11 203 194 0,5923
C-terminal 204 647 443 0,9045
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-203
C-terminal
204-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-Tlon
[NCBI] 		3447925 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29480.1 [NCBI]
Genbank nucleotide accession
PV891804.1 [NCBI]
CDS location
range 1 -> 1945
strand +
CDS
TCTTCCTTCTAGTGCGCTAACTGATAGTAATATTGACGCTTGGTTTACTCAACGTGTTTTGATTTCCGCCAGACCTGGCGCCAGACGCATTAATCTTGGGGTGGTAAAAAATACGGATAACTCATTTGATGTTTATCTTCATGCTCCTGCTGGGTGGATTCCTGAACTGTGGTTGAATCGTGTAAACGTACAGGCTAACAATGGGTCGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAGCCGGGATTGTATATAATTCACCATCTGATTATTTGATGGCTAACGATAGCACAATCCCACGCACAAACGTAGCTAACACGTTCAGTCAACCACAAGCGATCAGCGTTCCGGGCGGAAACGCTACGCTAACCCTGAACGGTGCCGTAGTTCGGGCCAATAACAACAACGCGATCGTTTACTCCATCCCGGAAGACGGTCAAGGCATGTACTTCCGCCCGAATGGCGATATGAACAGCGCGAAGCAGGTTGTTTTTGATGCGGCAAACTTTACCGTTACTGGGTTGAATGCCACTTTCAGCAATGCGGTTACGATGTTAAGCACGCTACGCGTTAACGGATCTTCTAACCTTCGCGGCGGCGTTGATGTTACCGCGTCTCAGAAGTTGCCACTGAAGGAAACAACCGCAACAACCGGGATTGGCGTTAACTTTATCGGCGACAATGCAACGGAGTGTTCTTTCGGTATTGAGAATACGGCTGGCGGATCGGCTGTATTCCATAACTATGCGCGAGGTGCATCTAACAGCGCCACGAAGAATAACCAGCTTTTAGGTGGTTACGGATCTCGACCGTGGTTAGGTTCTGCGTATACCGCGCACAGTAACGCCGCCTTACACTTCCTGGGGGCTGGCGATGCATCGGACACAAATCACGGCGGTTGGATTCGTCTATTGGTTACGCCTAAGGGGAAAAATATTGGATGGCGTTCTCCAGTCATGCGAATTTCTGACAATGGTGATACATGGTTAGTTACTGCTGGTAGTATGGTGTCGCCGGATCTTGATGAGGTTCGTAGTTTTGAAACGCTTAACGCAGCAGTTCCGAAATTCAACGCTCCAACCAATCAGGATGGTAGAGGGTTGAAGATTGTGGCGGATGGTGCGCCGGAAATTAACATGATTGCGCCTCGTGGTTCTAACGCTTCATCGCCTGCGGTTCGTGCAATGTGGTGCGATGGTAGCCTGGGTAACTCGGATAAATATATCGGCGCTACACAGGCATGGTCTAATTTCTTCTTTGGTGCATCTGGCCACGACGGGGAAAAATTCGACTCAATGCGAGGAGCGGTTAATATTCAGGCTCCGAAAGGGTGGGGGGCAACGAGTACGCCAACGCGAATCTTGTTTGAAACCTGCGCGACAGGCTCCACCACGCGAACATCTCGCTGGTGCGTTGACCACAACGGGAACTTCATCCCTATGGGCGATGGCGGTTATGATATTGGATGGGGTAGCGGTCGAGTCAACAACATCTACGCTAAAAATGGGGCAATCAACACCTCAGACGGTCGGATGAAGAACGACGTTCGAGCCATGAGCGATCCTGAAACCGAAGCGGCCAAAGCCATTGCGAAGGAGATCGGGTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTGCGCGAGCACTGCGGTTTGACCGTACAGCGTGCTATGGAGATCATGGAAAGTTTTGGTCTTGAGCCGTTTAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGCAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGACGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCATTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a40bb3e9485e59866b8ad61d43906f5fd59555eb92a8a10b95468f0c52ec41a9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7657
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank