Protein

View in Explore
Genbank accession
XPK42668.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MIVYNNQAPANPNNVGQFGATEGSIGAYKQAAEYAADSKYWALLAESKFGTIDDLIAQVERLYQQGVLLREDIEDLKQDFAAQDVRLMNLIAQTNAAVADANNSVALIDQKIVEVQKQLDILMDMKVTVTTLPPGSQATGSFDNQTGEIKLGIPEGEKGADGSVTDLSTVSSGVPELGDLGFYVDKDNNTVHKTTLENIANLIPSVRSISVNGGEAQDGDVALDINKTTVGLGNVLNVAQYSRQEINDKFDKPVKIYQSKAEADANAQYRQEGESVLVWEDTRYVFYTVAANKTLTPVKSESRILTVNSRSPDSTGNIDITIPTGNPSLYLGEMVMFPYDPNKTVSYPGVLPADGRLVSKENASDLGPSLVSGQLPVVSETEWQAGAKQYFSWGKLADGVTDADSTNYINIRLPDWTGGEAIRAPDSDKDSQYNGAVQAQKPYVVTVNNQTPDEITGNVNLSRSILGAASSGANSDITSLSGLTTPLSISQGGTGSTTVDGIRNALKITPFTSENNHAFIFSPNLLNRAVLRDDGYFIIQERSSTSSDSWEPNPISIEAGGTGASTASEALVNLGLGPTATLNVIPVANGGTGATNAAGARYNLGLGSVSTLDNVPIASGGTGAGDAAGALGNLGALSNTPANTGTGGTGARVQHAAGSGLFTLDMFNCYWYMQPEDTNFWVAHGVSYAGAGGEASGYGRISYAIKIADGTTKYVHCLTNKNTIIDTGGFIKAASPVVNIYANGQYETNDESEGVSVIRQGIGEYLITGCLGLNSDARWGGVDGGFEIPTDRNKQPRIWLDYEVKEDGSISVKTYHRTHPTSPVFARNEIEGFADGDPIDIPSDAFISVRVEMPSK
Physico‐chemical
properties
protein length:856 AA
molecular weight: 90630,14520 Da
isoelectric point:4,53708
aromaticity:0,07243
hydropathy:-0,27558

Domains

Domains [InterPro]
Coil
Unmapped
59–79
Coil DC_0709 IPR058008
DC_0709
STR
610–856
DC_0709
XPK42668.1
1 856
Architecture
STR
STR 183-856
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage OliverMaurmann_Bas86
[NCBI] 		3398429 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42668.1 [NCBI]
Genbank nucleotide accession
PQ850622.1 [NCBI]
CDS location
range 8998 -> 11568
strand +
CDS
ATGATCGTTTATAACAACCAAGCACCAGCTAATCCTAATAATGTTGGTCAGTTTGGTGCTACAGAAGGCTCTATCGGAGCCTATAAACAAGCAGCGGAATATGCTGCTGATTCTAAATATTGGGCACTTTTAGCAGAATCTAAGTTTGGGACAATTGATGACCTGATTGCACAGGTAGAGCGTCTATACCAACAAGGTGTTTTACTCCGAGAAGATATTGAAGATCTGAAGCAGGATTTTGCTGCTCAAGACGTTCGCTTAATGAACCTGATTGCTCAAACAAACGCTGCTGTTGCAGATGCCAATAACTCAGTTGCACTTATTGATCAAAAGATTGTAGAAGTCCAGAAGCAATTGGATATTCTAATGGATATGAAGGTTACTGTCACTACCCTGCCTCCGGGTTCTCAAGCTACTGGCTCTTTTGATAACCAAACTGGTGAGATTAAGCTGGGAATTCCTGAGGGTGAAAAAGGTGCAGATGGCTCTGTAACTGACTTATCAACAGTATCTTCTGGGGTTCCCGAGTTAGGGGATTTAGGTTTTTATGTAGACAAAGATAATAACACTGTACATAAAACCACTCTAGAAAACATTGCTAACCTGATTCCTTCTGTTCGCTCTATCTCTGTCAATGGTGGAGAGGCTCAGGATGGTGACGTTGCTTTGGATATTAATAAAACCACAGTGGGTTTAGGTAATGTTCTTAACGTAGCTCAATACAGTCGTCAAGAGATTAATGATAAGTTTGACAAACCTGTTAAGATTTATCAATCCAAAGCAGAAGCAGATGCAAATGCCCAATATCGTCAAGAGGGTGAATCTGTTTTAGTTTGGGAAGATACTCGGTATGTGTTCTACACTGTTGCTGCGAATAAAACCTTAACTCCGGTTAAGTCGGAAAGTCGTATCTTGACAGTAAACTCAAGATCACCTGACTCTACAGGTAATATTGATATTACAATACCTACAGGGAACCCTTCTCTATATTTGGGTGAAATGGTAATGTTTCCATATGATCCTAATAAAACTGTATCATACCCCGGTGTGTTACCTGCTGATGGTCGGTTGGTTTCTAAAGAAAACGCCTCTGATTTAGGTCCATCTCTTGTCAGTGGACAATTACCAGTAGTTAGCGAGACTGAATGGCAAGCTGGTGCTAAGCAGTATTTCTCTTGGGGTAAATTAGCTGATGGCGTTACTGATGCGGATTCTACTAACTACATCAATATTCGACTTCCTGATTGGACTGGAGGGGAGGCAATAAGAGCACCAGATTCTGATAAAGATTCTCAGTACAATGGGGCTGTACAAGCTCAGAAACCTTATGTTGTCACGGTAAATAACCAAACTCCTGATGAGATTACAGGGAACGTAAACCTCTCCAGATCTATCTTAGGAGCGGCTTCTTCTGGTGCAAACTCCGACATTACATCTTTATCTGGACTCACAACGCCGTTATCCATCTCTCAAGGCGGGACTGGATCTACAACCGTAGACGGGATTCGTAATGCTTTAAAAATAACCCCATTTACCAGTGAAAATAATCACGCATTTATCTTCTCACCGAACTTGTTAAACAGGGCTGTGTTGAGGGATGATGGGTACTTTATCATACAAGAGAGAAGCAGTACCTCATCTGATAGCTGGGAGCCTAATCCGATATCTATAGAAGCGGGTGGTACTGGAGCATCTACAGCCAGTGAGGCACTTGTTAATCTTGGTTTAGGTCCAACAGCTACTCTCAACGTCATACCGGTTGCCAATGGCGGTACTGGAGCAACTAATGCTGCTGGCGCTCGTTATAATTTAGGATTGGGGAGCGTTTCTACTCTTGATAATGTACCAATCGCCAGCGGTGGTACAGGTGCTGGGGATGCCGCTGGTGCCCTAGGCAACCTTGGAGCATTGAGTAACACTCCAGCAAATACAGGTACAGGTGGTACTGGTGCGCGAGTCCAACATGCCGCCGGAAGTGGCCTGTTTACTTTAGACATGTTTAACTGCTACTGGTATATGCAGCCAGAGGATACTAACTTCTGGGTTGCCCACGGTGTGTCATATGCAGGAGCTGGTGGCGAAGCCTCAGGTTATGGTCGTATATCTTACGCAATAAAGATTGCAGATGGAACAACAAAATATGTCCATTGTCTTACAAACAAAAACACTATTATTGATACAGGCGGGTTTATCAAAGCGGCATCTCCGGTAGTTAATATTTATGCCAACGGTCAATATGAAACGAATGATGAATCTGAGGGGGTTAGTGTCATCCGGCAGGGTATTGGTGAATATCTGATTACTGGTTGCCTCGGTCTTAACTCTGATGCAAGATGGGGTGGGGTGGATGGTGGGTTTGAAATCCCAACAGATCGCAATAAGCAGCCTAGGATTTGGCTGGACTATGAGGTTAAAGAAGATGGTTCTATTTCAGTTAAAACCTATCACAGAACTCACCCAACCTCTCCAGTTTTTGCTAGAAATGAGATAGAAGGTTTTGCTGATGGAGACCCTATTGATATTCCAAGTGATGCTTTTATCTCTGTTCGTGTAGAGATGCCATCCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5de8cbf015fb03ec6525aea15a32e4387ae287419dda1995ef40e16eaddf10e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank