Protein

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Genbank accession
QSJ04200.1 [GenBank]
Protein name
long tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MENGINKKGFFDLKVEPHLKPISDLGIGFYNLDENTATLRFQLSNNAGSLLISENNLSVYGYFESSNGSVSEVIELEIVDELNGVAEITLDQDFLQASTSTKVKGQLYIGVKNVDGRPDYNEVAVLGEFTFEVADALINKISSFTKIEYIRMFSQLKAQIQKEVADIQEAIKNGADYVAEMQTVKEQGIAQINQTVTEGKAYIDSVIAQAQTNINDTATSAISDVKTAKDNALSTMNNTMSEKVSEVESVSNNAVTHVDDKLTEFNQAILDNEFIQPETLQQTLDNLQWQKHKLTENDGFMRMIDKPNLSRLDDYFTKTEVVYVTTPSNSPHGIGYSGFIKAYFRSGGYGIVEFQPYNTPNIYQNRREGNGWTGWKEITNNQTDTNWITYQTINGATSNTAFKNEGDNGFDCAYRTITNGKVITKKVRINATQVAVNQVLAQLPTNFAKSTQRFPIGNSAFIVIKPNGEVSLRVSGDISSWDSSNEIYTELTWHD
Physico‐chemical
properties
protein length:495 AA
molecular weight: 55153,61740 Da
isoelectric point:4,76006
aromaticity:0,09293
hydropathy:-0,43596

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
11–140
G3DSA:2.60.40.3350 Coil cd19958
IPR018913
ATT
13–162
IPR018913
DC_0196
STR
25–495
DC_0196
QSJ04200.1
1 495
Architecture
ATT
STR
ATT 11-162 | STR 163-495
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB-SscS-F1
[NCBI] 		2812861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSJ04200.1 [NCBI]
Genbank nucleotide accession
MW589261.1 [NCBI]
CDS location
range 78402 -> 79889
strand -
CDS
ATGGAAAATGGAATCAATAAAAAAGGTTTCTTTGATTTAAAAGTTGAGCCTCATTTAAAGCCAATCTCTGATTTAGGGATTGGTTTTTATAATTTAGATGAGAATACAGCAACATTAAGATTTCAATTAAGTAATAATGCAGGTTCATTATTGATTAGTGAAAACAATTTAAGTGTTTATGGTTATTTTGAATCAAGTAATGGTTCTGTTTCTGAAGTAATTGAATTAGAAATTGTTGATGAGTTAAATGGAGTAGCTGAAATTACTTTAGACCAAGACTTTTTACAAGCTAGTACATCTACTAAAGTAAAAGGACAATTATATATAGGTGTGAAAAATGTTGACGGTAGACCTGACTATAATGAGGTAGCTGTATTAGGTGAATTTACATTTGAAGTAGCAGATGCACTAATAAATAAAATTTCATCATTTACTAAGATTGAGTATATTAGAATGTTTAGTCAATTGAAAGCTCAAATTCAAAAAGAGGTTGCTGATATTCAAGAAGCAATTAAAAATGGTGCAGATTATGTTGCAGAAATGCAAACCGTAAAAGAACAAGGTATTGCTCAAATCAATCAAACCGTAACAGAAGGTAAAGCATATATAGATAGTGTTATTGCACAAGCACAAACAAATATTAATGATACAGCAACAAGTGCTATTAGTGATGTAAAAACTGCTAAAGACAATGCCTTATCTACAATGAATAATACAATGAGTGAAAAAGTAAGTGAAGTTGAAAGCGTATCTAACAATGCAGTTACACATGTTGATGATAAATTAACCGAGTTTAATCAAGCTATTCTTGATAACGAATTTATACAACCTGAAACACTACAACAAACACTAGATAATTTACAGTGGCAAAAACACAAGTTAACTGAGAATGACGGTTTTATGAGAATGATTGATAAGCCGAACTTATCAAGATTAGATGATTATTTCACAAAAACAGAAGTCGTTTATGTTACCACACCTTCAAATAGTCCTCATGGTATTGGTTATAGTGGTTTCATAAAAGCCTATTTCAGAAGTGGTGGCTATGGAATTGTAGAATTTCAGCCTTACAATACACCTAACATCTATCAAAATAGACGTGAAGGTAACGGTTGGACTGGGTGGAAAGAAATCACTAACAACCAAACAGATACAAATTGGATAACTTACCAAACTATAAATGGAGCAACTAGCAATACAGCATTTAAAAATGAGGGTGATAATGGGTTTGACTGTGCTTATAGAACAATCACAAATGGTAAAGTAATTACCAAAAAAGTACGAATTAACGCAACACAGGTAGCAGTCAATCAAGTATTGGCGCAATTACCAACTAACTTCGCAAAATCAACTCAAAGATTCCCTATTGGAAACAGTGCGTTTATTGTGATTAAGCCTAACGGAGAAGTTAGTTTAAGAGTTAGTGGAGATATTTCAAGTTGGGATTCAAGTAATGAAATTTACACAGAGCTAACATGGCACGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8b046710518af3518b40b19f9b9e737fccb130fff48a658771e56177065bb82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8151
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of vB-SscS-F1 Ji,Y. 2019-07-03 — GenBank