Protein

View in Explore
Genbank accession
AYP30255.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MQIWIHDKSMRKVCALNNNVPDMLPYSSSQWHTYLEYSTSTFDFTIPKIVNGKLHDDIKYINDQMFVSFYFDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAEMSRPLASVDGPKTLEWYLRNLELLGFAGLEIGVNEISDRTRTLTFESQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTMKRFIIDIYQEADKNHHGIGKVRGDVILYYQSGLKGVQVTSDKTQLFNAGVFTGANGVNLDSVEFEEKNELGQVEFYSRKGTSFVFAPLSRERYPSTMNPDSADNWTRKDFQTEYKDVESLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPANNSVVFTNFKKLDNKPSDALQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPILKQGDKIVDATYRFVIDGTIKYVGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGDDGKTTYFHTAWSYSADGTDGFTTVYPNLNLLDGTRDFSGNWENGGEWTNDGTYKGLVVKKRVWKWAGIYKTFTAPKDGKYTFSAYVKSSGNAANIIRFVALNGVDLYSSIRYFDNNFDWLRDSFTITLKAKDTIVAKYEIAGSGTDSILWTAGHKWEEGSVATPWMPSASEVKTADYPSFIGHYTDYTQADSPNPQDYTWSLIRGNDGIPGPKGADGRTPYVHFAYADSADGQKGFSLTQTGSKRYLGVLTNFIKEDSTNPADYTWSDAAGSISVGGRNLLVKTNQGITNWDWTMSNGDKSVEEVNIDGIRAVKLTKGTKTANTGWNYIQYRGLLRKLIRPNTKYTLSFDVKPSVDVSFSATLIRGNRKDELTDTVLMNKALANQWTKVSCVLTSKETLSGDLNQVVYLAGMPTTNGNWVIIKNIKLEEGDIPTQWTPAIEDIQDEIYSKADDVLTQAQLNRLNEMNSIIKAELDAKASLDTLNQWVEAYQNFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMAASNEGLVVGKKDKSSSIMFNPNGRISMFSAGNEVMYISKGVINIENGIFSKTIQIGRYREEQDLLNPDRNVIRYVGGA
Physico‐chemical
properties
protein length:1114 AA
molecular weight: 125196,56550 Da
isoelectric point:5,34562
aromaticity:0,11131
hydropathy:-0,45619

Domains

Domains [InterPro]
DC_0002
STR
1–679
DC_0002 DC_0002
IPR010572
ENZ
142–381
IPR010572 IPR008983 DC_0002 G3DSA:2.60.120.260 Coil
IPR008979
STR
784–928
IPR008979
AYP30255.1
1 1114
Architecture
STR
STR 1-1114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SWK5
[NCBI] 		2419662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP30255.1 [NCBI]
Genbank nucleotide accession
MH892381.1 [NCBI]
CDS location
range 15679 -> 19023
strand +
CDS
ATGCAAATTTGGATTCATGATAAAAGCATGCGCAAGGTGTGTGCTTTAAATAACAACGTTCCTGACATGCTTCCATACTCGAGCAGTCAGTGGCACACCTACCTTGAATACTCAACCAGTACATTTGACTTTACGATTCCTAAAATTGTAAATGGAAAACTTCACGATGATATTAAATACATCAATGATCAGATGTTTGTATCATTCTATTTTGACAATTCCTATCACGTTTTCTATGTTTCTCAACTAGTTGAAAATGATTTTAGTTTTCAAGTCACTTGTAATAATACTAACTTAGAATTAGCAGCAGAAATGTCGCGTCCTTTAGCCAGTGTTGATGGTCCTAAAACCCTTGAGTGGTATCTTCGGAATCTTGAATTGCTTGGTTTTGCAGGACTTGAAATAGGTGTCAATGAAATTTCTGATAGAACAAGAACGCTTACTTTTGAATCGCAAAGTGGCACAAAGCTAGAACAACTTCATAGCTTGATGAATCAATTTGATGCTGAATTTATTTTTCGTACCGAATTAAACCGAGACGGAACTATGAAACGTTTCATCATCGACATCTACCAAGAAGCAGATAAAAACCATCACGGAATTGGAAAGGTTCGAGGAGATGTCATTCTCTACTATCAAAGCGGTCTGAAAGGCGTTCAAGTAACTAGTGATAAGACACAACTGTTTAATGCTGGTGTTTTCACTGGTGCAAACGGGGTTAATCTTGATAGCGTTGAGTTTGAAGAAAAAAATGAGTTAGGACAAGTAGAGTTCTATTCTCGAAAGGGCACTAGCTTCGTTTTCGCCCCACTATCAAGGGAACGCTACCCATCTACCATGAATCCAGACAGCGCTGATAACTGGACACGTAAGGATTTTCAAACAGAATACAAGGACGTTGAATCCTTAAAAGCTTACGCCTTGCGTACTATCAAGCAGTATGCTTATCCACTAATGACATATACCGTAAGTGTTCAATCTAGTTTCATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCTGCGAATAATTCAGTAGTTTTCACCAACTTTAAAAAGTTGGATAATAAACCATCGGATGCCTTGCAACAACGTATCGATGAGATTGTTTCTAAGTCACTGCCATATCATGTTGAGATAAGGACCACGAATGGAACAGTATTTAAGAACGGCATTGGTCGTTCTACTGTTAAACCAATTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGTACTATTAAATACGTAGGTATGACCTATGACATGGTAGCGTCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATGATGGGAAGACTACATATTTTCACACAGCATGGTCTTACAGCGCAGACGGCACTGATGGTTTCACGACTGTTTATCCTAATTTGAATTTGTTGGATGGTACTAGAGATTTTAGCGGTAATTGGGAAAATGGTGGAGAATGGACGAACGACGGAACCTACAAAGGCTTAGTTGTTAAAAAAAGAGTGTGGAAATGGGCAGGAATTTATAAAACATTCACAGCACCTAAAGACGGAAAATACACTTTCTCAGCTTATGTTAAAAGTTCAGGAAATGCAGCAAATATAATTAGATTTGTGGCCCTTAACGGTGTGGATTTATACTCTTCAATAAGGTACTTTGATAATAACTTTGATTGGCTTAGAGACAGTTTTACTATAACTCTGAAAGCCAAGGATACCATTGTGGCCAAATATGAAATAGCTGGTTCTGGAACAGATTCAATTCTATGGACGGCTGGGCATAAGTGGGAAGAGGGTTCAGTCGCTACCCCTTGGATGCCCTCGGCTAGCGAAGTCAAAACTGCTGACTATCCAAGTTTCATCGGACACTACACAGACTACACGCAAGCAGATAGTCCTAACCCTCAAGATTACACTTGGAGTCTCATTCGAGGGAATGATGGTATTCCTGGTCCTAAAGGTGCGGACGGACGAACGCCTTACGTGCACTTCGCTTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTGACACAGACTGGAAGTAAACGCTATTTAGGTGTGCTAACCAACTTCATAAAAGAAGACAGCACAAACCCAGCAGATTATACATGGAGTGACGCTGCTGGTAGCATTTCGGTTGGTGGTCGGAACTTACTTGTAAAAACCAATCAAGGTATTACTAATTGGGATTGGACGATGTCGAATGGTGACAAGAGCGTTGAAGAAGTCAATATTGATGGTATTCGTGCTGTTAAATTAACCAAAGGTACAAAAACAGCAAATACTGGTTGGAACTACATTCAATATCGAGGTTTGTTGCGTAAACTCATACGACCAAACACAAAGTACACTCTTTCTTTTGATGTAAAACCAAGTGTTGATGTAAGTTTTTCAGCAACGCTAATAAGAGGCAACCGCAAAGATGAATTGACTGATACTGTCCTTATGAATAAAGCTTTGGCAAATCAATGGACTAAAGTATCATGTGTTCTGACAAGTAAAGAAACGTTATCAGGTGATTTAAATCAAGTTGTCTACTTGGCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAGAATATCAAACTCGAAGAAGGTGACATACCTACTCAGTGGACACCTGCAATTGAGGACATACAAGATGAAATTTATTCCAAGGCAGACGATGTCCTAACACAAGCACAACTCAACAGACTGAACGAAATGAACTCTATTATTAAAGCTGAATTAGACGCTAAAGCGTCGCTTGATACACTCAATCAGTGGGTGGAAGCCTATCAAAATTTTGTTAACGCAAACAATGCCAATCGTGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTGTTGGTAAAAAAGATAAATCAAGCTCTATCATGTTCAATCCAAACGGGCGTATCTCAATGTTCTCAGCTGGGAACGAGGTAATGTACATTTCAAAAGGTGTCATCAATATCGAAAACGGTATTTTCTCTAAAACTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAATCCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0df4a82bb8cb15d7f948f40b497fcfc8fc8752d5ed143784385e20e4baaeca8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank