Protein

View in Explore
Genbank accession
XTK88109.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANPTTIATYPLLASKNYQIPFEYLARRFVFVTLVGPTERRPLSVTLDYRFVDPTHIETNYRWSEADGFEYIEIKRFTSATNRLVDFTDGSILRAIDLNVSQIQSLHIAEEGRDALEDRLGLTPNNELDARNRRIINLAPGVALTDAVNLNQLKGTEAAAEASRKAAEAAANRAQQAVNSINAVPGSYLTPRVPPYNAAGNGIDNDTAAFTAFEKDHVSRTVDLGGATYFVDTIPTGNVYINGNWKLAGGSVGFTRPAFEGDSVLNRPGLYIPYGGQLNRFKTDLMNPLCQMVGFVFIGDSITWGSGNQPETEPTDPRNGTLRDPRDWFGTNSYVNIVRRYIIEEFVQGATVTTEKWFESPWGEPIVHAKKKLWLLPWGPEFPSQIVGASISITNQDAATLPTKKRVLISNSNSGDTTQSTYGQISFTFTGTQFGILLGNVTGNECIYRIYLNDVFVSEHSSAAGTPTDDGLGMPAKGHSERTHTIPYTRNGVVTIRAFRPIGHAGTSVMRFGGIFINKHVRLTNNGINGSTYYAYRMYNMPPTGPSFSGSVAINEGDLYCSIQLGSNDRGSNRHAQTIHAIKEEINAFLNVIPGRCSPILLCANPAIDIPGANLTMEEIRNAIHAVARERALDFIDNYTLFRGVKKTSIGRDQLHPNQWGFSVMGANFIKAIEGATDISVKPLPPPVPSSWFAPTDPRFAYAGTAQIVDRDASAAFLGKQRLLRFTASMSETITIKVSNADQIGIAFSSVAERCMAYRLTVDGVDQGIFPTAYLVSGGGTQVYANTRWHQFTVGARTLVFTPIWNPDEPEGTQVLYLEAFGVREGATIEPI
Physico‐chemical
properties
protein length:832 AA
molecular weight: 91192,58920 Da
isoelectric point:6,20911
aromaticity:0,09856
hydropathy:-0,21803

Domains

Domains [InterPro]
DC_1263
ATT
1–235
DC_1263 SSF52266
IPR005604
ATT
14–130
IPR005604 IPR008635 DC_1326 DC_1326
IPR011049
STR
121–187
IPR011049 IPR036514
IPR011049
STR
129–156
IPR011049 Coil
XTK88109.1
1 832
Architecture
ATT
STR
ATT 1-235 | STR 293-832
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTK88109.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9881
Central domain 203 407 206 0,8801
C-terminal 408 832 424 0,3955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-407
C-terminal
408-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Stamos
[NCBI] 		3418345 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTK88109.1 [NCBI]
Genbank nucleotide accession
PV565045.1 [NCBI]
CDS location
range 34688 -> 37186
strand +
CDS
ATGGCCAACCCTACGACCATCGCCACGTACCCATTGCTGGCGAGCAAGAACTATCAGATCCCATTCGAGTACCTCGCTCGTCGCTTCGTGTTCGTGACCCTTGTGGGACCTACCGAGCGCCGCCCGCTTAGCGTCACCCTCGACTATCGCTTCGTGGATCCTACCCACATCGAGACCAATTACCGCTGGTCTGAGGCGGACGGCTTCGAGTACATCGAGATCAAGCGCTTCACCTCGGCCACTAACCGTCTGGTGGACTTCACCGATGGCTCCATCCTGCGGGCAATCGACCTGAACGTGAGCCAGATCCAGAGCCTGCACATTGCTGAAGAAGGCCGTGATGCTCTGGAGGATCGTCTGGGTCTGACCCCGAACAACGAGTTGGATGCCCGTAACCGCCGCATCATCAACCTCGCTCCGGGCGTGGCTCTGACCGATGCTGTGAACCTAAACCAGCTGAAGGGCACTGAAGCAGCCGCAGAGGCGAGCCGTAAGGCAGCAGAGGCAGCCGCCAACCGTGCCCAGCAAGCGGTCAACTCCATCAACGCCGTTCCCGGCTCGTACCTGACCCCGCGTGTGCCTCCGTACAACGCCGCAGGTAACGGGATCGACAACGACACCGCAGCCTTCACGGCCTTCGAGAAGGACCATGTGTCCCGCACCGTTGACCTCGGCGGCGCGACGTACTTCGTTGACACCATCCCTACCGGCAACGTCTACATCAACGGCAACTGGAAGCTCGCTGGTGGGTCCGTAGGGTTCACCCGTCCGGCCTTCGAGGGCGACTCTGTGCTGAACCGTCCGGGTCTCTACATCCCGTATGGTGGCCAGTTGAACCGCTTCAAGACCGACCTGATGAACCCGCTGTGCCAGATGGTCGGCTTTGTGTTCATTGGCGACTCCATCACGTGGGGCTCGGGCAACCAGCCTGAGACGGAGCCTACTGATCCCCGTAACGGCACCTTGCGTGACCCACGCGACTGGTTCGGCACCAACTCGTACGTGAACATCGTGCGCCGTTACATCATCGAAGAGTTCGTTCAAGGCGCTACGGTGACCACTGAGAAGTGGTTTGAGAGCCCTTGGGGTGAACCTATCGTGCACGCCAAGAAGAAGCTGTGGCTCCTGCCATGGGGCCCTGAGTTCCCGTCTCAGATCGTCGGTGCTTCCATCTCGATTACCAATCAGGATGCTGCAACGCTGCCGACTAAGAAGCGCGTGTTGATCTCCAACAGCAACTCCGGCGACACCACTCAGTCCACCTACGGTCAGATCAGCTTCACGTTCACTGGTACTCAGTTCGGCATCCTGCTGGGCAACGTGACTGGCAACGAGTGCATCTACCGGATCTACCTGAACGATGTGTTCGTCAGTGAGCACTCCTCGGCTGCGGGCACCCCTACCGATGACGGACTGGGAATGCCAGCGAAAGGCCACAGTGAGCGTACCCACACGATCCCCTACACCCGTAACGGTGTCGTGACGATCCGTGCGTTCCGTCCTATCGGCCACGCTGGAACCTCGGTGATGCGCTTCGGCGGTATCTTCATCAACAAGCATGTCCGCCTTACCAACAACGGCATCAACGGATCCACCTACTACGCCTATCGGATGTACAATATGCCACCGACTGGTCCTTCGTTCAGTGGCTCCGTGGCGATCAACGAGGGCGACCTGTACTGCTCCATCCAGCTCGGGTCGAACGACCGTGGCTCCAACCGTCACGCTCAGACCATCCATGCGATCAAGGAGGAGATCAATGCGTTCCTCAACGTGATCCCCGGTCGGTGCTCCCCGATCCTACTGTGTGCGAACCCGGCGATTGACATTCCGGGAGCAAACCTGACCATGGAAGAGATCCGCAACGCGATCCACGCCGTGGCCCGTGAGCGTGCTCTGGACTTCATTGATAACTACACGTTGTTCCGTGGCGTCAAGAAGACCTCCATCGGGCGCGACCAGCTTCACCCTAACCAGTGGGGCTTCAGCGTGATGGGCGCCAACTTCATCAAGGCAATCGAAGGGGCGACAGACATCAGCGTGAAGCCGCTGCCTCCTCCTGTTCCTTCGTCGTGGTTTGCACCGACTGACCCTCGGTTTGCCTATGCGGGTACTGCCCAGATAGTGGACCGTGACGCCTCGGCAGCGTTCCTCGGTAAGCAGCGACTGCTGCGCTTCACCGCCTCCATGAGCGAGACCATCACCATCAAGGTTTCCAACGCTGACCAAATCGGCATTGCATTCTCCTCTGTGGCTGAGCGCTGCATGGCGTACCGTCTGACTGTGGACGGAGTGGACCAAGGGATCTTCCCCACGGCCTATCTGGTCTCCGGTGGCGGAACTCAGGTCTACGCGAACACTCGCTGGCACCAGTTCACTGTGGGTGCGCGCACCCTCGTCTTTACCCCGATCTGGAACCCAGACGAGCCAGAGGGCACTCAGGTCCTGTACCTTGAGGCATTCGGTGTCCGTGAGGGCGCCACAATCGAACCAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c6e5bf695ab06a8b900f4538f30e3de77e13f23806351bec48029617bee37c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3045
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50