Protein

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Genbank accession
WCZ57328.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNVNNPWVKYYVGALMPTIMFGGVPIGSYKVRISGQISLPDGVTIDSSGYYEYPTVFEVRYNFVPPTAPVNIAFKAARIADGKERYDLRVQWDWNRGAGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPSRQDTTDSAVQTFILKEDTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDADGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNATAKPKLDIGNATQYIRYDGDTLRISSGVVIGTPNGDIDIATGIQGKQTVFIYILGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGRPGDNGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:694 AA
molecular weight: 75277,66280 Da
isoelectric point:5,97244
aromaticity:0,10231
hydropathy:-0,23588

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551 DC_1191
WCZ57328.1
1 694
Architecture
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57328.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8789
Central domain 410 660 252 0,1752
C-terminal 661 694 33 0,9246
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-660
C-terminal
661-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K18
[NCBI] 		3027606 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57328.1 [NCBI]
Genbank nucleotide accession
OQ291031.1 [NCBI]
CDS location
range 85947 -> 88031
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCTTAACTGGGTATACGTTGGCGTATATCCAGCATTCTATCTACTCTGATTATGACGTTATAGGCAGGTCTTTTTGGCTTAAAGAAGGTAGCAACGTTACTCGTAGAGATTTTACTGGGGTTGATACCTTTTCTGTAACTATTAATAACCTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCTATTATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTATCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATTACAGGTGCTAGATGTGAATCAGAGCCTGTAGACGTAGGTGTTGGAGCGCCAATAGTTTATATAGATACTACAGGAGAAGCTGATTATTGTACTATAGAGTTAAAAAATAATTCTAATGTTAATAATCCGTGGGTTAAATATTACGTTGGTGCGTTGATGCCAACTATTATGTTTGGTGGTGTGCCAATCGGATCCTATAAGGTAAGAATTTCTGGACAAATATCCCTACCAGATGGGGTAACTATTGATTCCTCTGGATACTATGAGTATCCTACTGTCTTTGAAGTTAGATATAACTTTGTACCTCCTACAGCTCCTGTTAATATTGCGTTTAAAGCTGCGCGTATAGCAGACGGTAAAGAACGCTATGATTTACGTGTGCAATGGGATTGGAACAGGGGTGCAGGTGCCAACGTTCGTGAGTTCGTTCTATCTTATATAGATTCAGCAGAGTTTGCTAGAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGTGCTGCTCAGTCGGCAACAATTATATCATTCCCATGGAAAGTAGAGCATAAATTTAAAGTGTCATCTATTGCCTGGGGACCAAGTAGGCAGGATACTACCGATTCTGCTGTACAAACCTTTATACTAAAGGAAGATACCCCCCTAGATAACAGTTTTGTGAATGAAACTGGTATTGAGGTAAATTACGCGTATATTAAGGGTAAGATCAAAGATGGTTCTACTTGGAAACAAACTTTCCTAATAGATGCTGCTACTGGTGCTATTAATATAGGTCTTCTAGATGCAGATGGAAAAGCACCAATATCTTTTGACCCTATTAAAAAGATAGTTAACGTTGATGGAAGTGTAATAACTAAAACTATTAATGCTGCGAACTTTGTCATGACTAACTTAACTGGTCAAGACAACCCGGCAATTTATACTCAGGGTAAAACTTGGGGAGATACAAAATCTGGCATTTGGATGGGCATGGATAATGCTACTGCGAAGCCAAAACTAGACATTGGTAATGCTACACAGTATATTCGTTATGATGGTGATACATTAAGAATCTCTAGTGGGGTTGTAATTGGCACACCTAACGGTGACATCGATATAGCGACAGGTATACAAGGTAAACAAACAGTATTTATTTATATTCTAGGTACTTCATTACCTGCTAAACCAACAAGCCCCGCATATCCACCTTCTGGTTGGTCTAAAACCCCGCCGAATAGAACATCTAATACTCAGAATATTTACTGCTCTACTGGTACTCTAGATCCTGTTACTAACCAATTAGTATCCGGAACCAGTTGGTCAGATGTAGTTCAATGGAGTGGTACTGAAGGTGTTGATGGTAGACCTGGGGCAGATGGACGGCCAGGTGATAATGGACAACGTGGTCCGGGAATGTATTCTCTTGCTATTGCAAATTTAACCGCATGGAATGATTCTCAGGCTAATTCGTTTTTTACATCTAACTTTGGTACTGGTCCTGTTAAATATGATGTATTAACCGAGTATAAAAGTGGAGCACCAGGAACAGCGTTTACTAGGCAGTGGAATGGTTCAGCATGGGCTAGCCCTGCAATGGTTTTACATGGTGATATGATAGTTAATGGTACGGTAACTGCTAGTAAAATTGTTGCTAATAACGCTTTCTTATCCCAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAATCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5527cc2e5a1c943fbb6a6c66621bd456f128a64fdb0d766491a160f071ce09b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K18 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank