Protein

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Genbank accession
YP_009844000.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFVYIKFDENGYITDFKKEPEDGYTKSFVLNKDIKNFVKFSDKFRWDTDSQAIITPSNLPKTVDYEEAMNQINSLSTTINSLTNVMIGGI
Physico‐chemical
properties
protein length:90 AA
molecular weight: 10372,59010 Da
isoelectric point:4,76029
aromaticity:0,13333
hydropathy:-0,42444

Domains

Domains [InterPro]
DC_2232
STR
1–90
DC_2232
Coil
Unmapped
65–85
Coil
YP_009844000.1
1 90
Architecture
STR
STR 1-90
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage 521B
[NCBI] 		2510942 Uroviricota > Caudoviricetes > Herelleviridae > Tybeckvirus tv521B >
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009844000.1 [NCBI]
Genbank nucleotide accession
NC_048752.1 [NCBI]
CDS location
range 136048 -> 136320
strand +
CDS
TTGTTCGTATATATTAAGTTTGACGAAAATGGGTATATTACTGATTTTAAGAAAGAACCAGAAGATGGCTATACAAAATCATTTGTATTAAATAAAGATATTAAAAATTTTGTAAAGTTTAGCGATAAATTTAGATGGGATACAGATAGCCAAGCGATTATTACCCCAAGTAATCTTCCTAAGACAGTAGATTATGAAGAAGCTATGAATCAGATTAACTCATTAAGTACAACGATTAATAGTTTAACTAATGTTATGATTGGAGGAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2f3ee12c5cd1dc7b0fd064da50b1c26579b8de86e2ec9c361173ac1e5c1291bf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7913
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank