Protein

View in Explore
Genbank accession
QXV73838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MPGQSDNIILTTAGLNYLKARKQAGQKAVIQRFRIGDEYRFIPSEADTAIHGNQVYEGLAMEQMWWIQYSPDEIVVRCRVDSDKGDFLIGNLGLYTDTNELLFIRNFAYQHHKMHTTDKAPGGRWTFQLRIMTPNVLDLFDMSSIEQRYADMNERLLSNADTPSHPFDSFYTEIQLNDAFLPTNRSGYMTLSGRTSRSWYSPMFQMAESNVIVFDRYELSGGSAGDRHQGIW
Physico‐chemical
properties
protein length:232 AA
molecular weight: 26689,66690 Da
isoelectric point:5,49488
aromaticity:0,12069
hydropathy:-0,49009

Domains

Domains [InterPro]
DC_0381
STR
1–135
DC_0381
IPR022225
ATT
8–117
IPR022225
DC_2244
STR
110–232
DC_2244
QXV73838.1
1 232
Architecture
ATT
STR
ATT 1-117 | STR 118-232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N46
[NCBI] 		2836127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV73838.1 [NCBI]
Genbank nucleotide accession
MW980063.1 [NCBI]
CDS location
range 82602 -> 83300
strand -
CDS
ATGCCCGGACAATCAGACAACATTATTCTTACCACAGCGGGCTTGAACTATCTCAAGGCTCGCAAACAGGCTGGTCAGAAGGCGGTCATTCAGCGCTTTCGCATTGGTGACGAGTATCGCTTTATACCAAGCGAGGCCGATACGGCGATCCATGGCAATCAAGTCTATGAAGGGCTTGCCATGGAGCAGATGTGGTGGATTCAGTATTCGCCGGATGAAATCGTCGTGCGCTGCCGCGTCGATAGCGATAAGGGCGATTTCCTCATTGGCAATCTCGGTCTTTATACCGATACCAATGAGTTGCTGTTCATTCGCAATTTCGCCTACCAGCATCACAAGATGCATACCACGGATAAAGCGCCGGGTGGTAGGTGGACGTTCCAGCTTCGTATCATGACGCCGAACGTGCTTGATCTCTTCGATATGTCGAGCATCGAGCAGCGTTATGCCGATATGAATGAGCGACTGCTTTCCAACGCAGACACGCCATCGCATCCGTTCGATAGCTTCTACACCGAAATCCAACTCAACGACGCGTTTCTACCAACGAACCGTTCCGGCTACATGACGCTTTCAGGCCGCACGTCGCGTTCGTGGTATTCGCCAATGTTCCAGATGGCCGAGTCCAACGTCATCGTCTTTGATCGCTACGAGCTTTCAGGCGGATCGGCGGGCGACCGTCACCAAGGCATCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4ddc4ef357327b7870595f69e04bff1d0337c51f3293063a208fd258fa3b5e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6680
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank