Protein

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Genbank accession
AAO61371.1 [GenBank]
Protein name
minor virion protein VP1
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAYTSKLKEWGAVAEERSEFPDGYRYTKENPPVTHYDNFLVHNLIEDVQHLVDLTNLIDPDNDGQVADAETIQGKSPEQLGGFKFIQTDNPTEKTQGTTWFKNSNHLLFVSDGSRYDVFPEVGYQEYDSMAEDGLTVLHETVPRTKLTEDGRIMLINEQTVADFEDTYEPNHELWSWTNGTSFLSAQTGTILSGTQSLQVQAVGERATPHLTREAPIIQDLEVSAQVELDTANINDFSGIEVFNGTTRLLRIQYNDGDGNVELYTGSGTVELMANWSVGTTHDYEFDWDFSNDQYDLYIDGVLDGTYGLESPTSGWDELRIDNQTANSGATRNVYVEDIHTGAREYGETVVKFPDPDERIQNWDLVRHTKTLAGESVIIDVEDESGTVLLADVQQNEDISSHVSANTNPQFRVRISRENNANNPSLDAVFRRWTMRPGDTGLSKKIRKKQESSRNKARHIHTRLATRGN
Physico‐chemical
properties
protein length:469 AA
molecular weight: 52870,09430 Da
isoelectric point:4,57681
aromaticity:0,08742
hydropathy:-0,69829

Domains

Domains [InterPro]
DC_0289
ATT
1–185
DC_0289 IPR013320 DC_0290
IPR013320
STR
190–394
IPR013320
AAO61371.1
1 469
Architecture
ATT
STR
RBD
ATT 1-185 | STR 186-394 | RBD 395-469
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halophage HF1
[NCBI] 		2847106 Uroviricota > Caudoviricetes > Thumleimavirales > Haloferacalesvirus > Haloferacalesvirus moolapense
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAO61371.1 [NCBI]
Genbank nucleotide accession
AY190604 [NCBI]
CDS location
range 50971 -> 52380
strand -
CDS
ATGGCGTACACTTCTAAACTCAAGGAATGGGGAGCCGTCGCTGAGGAGCGTTCGGAGTTCCCCGATGGGTACAGGTACACGAAGGAAAACCCGCCCGTCACGCACTACGACAACTTCCTCGTACACAATCTCATCGAGGATGTTCAGCACCTCGTTGACCTAACGAATCTCATCGACCCGGACAACGATGGGCAGGTCGCGGATGCTGAGACAATTCAGGGGAAGTCCCCCGAACAGCTTGGTGGTTTCAAGTTCATCCAGACGGACAACCCGACCGAGAAGACGCAGGGGACGACGTGGTTCAAGAACAGCAACCACCTCCTGTTCGTCTCTGATGGCTCTCGGTACGACGTGTTCCCCGAGGTCGGCTATCAGGAATACGACTCTATGGCAGAGGACGGTCTAACTGTCCTTCACGAGACGGTTCCCCGGACGAAGCTGACTGAGGACGGTCGGATTATGCTCATCAACGAGCAGACCGTCGCTGACTTCGAGGACACCTACGAACCGAACCACGAGCTTTGGTCGTGGACGAACGGAACTTCTTTCCTCTCTGCTCAGACCGGGACGATTCTCTCGGGCACTCAGTCGCTTCAGGTTCAGGCGGTCGGTGAGCGTGCGACTCCCCATCTGACTCGGGAAGCGCCGATTATCCAAGACCTCGAAGTGTCGGCTCAGGTTGAGTTGGACACCGCGAACATCAACGACTTCTCTGGTATCGAGGTCTTCAACGGGACGACCCGCCTTCTCCGTATCCAGTATAACGACGGTGACGGCAACGTTGAACTCTATACTGGTAGCGGGACTGTTGAGCTGATGGCTAATTGGTCGGTCGGGACGACCCACGATTACGAGTTCGATTGGGACTTCTCTAACGACCAGTACGACCTCTACATCGACGGGGTTCTCGATGGAACCTACGGCCTCGAATCTCCCACTTCTGGATGGGACGAGTTGCGTATTGACAATCAGACTGCCAACTCTGGTGCTACCCGAAATGTCTACGTAGAAGACATTCACACGGGCGCTCGGGAATACGGCGAAACAGTCGTTAAGTTCCCCGACCCGGACGAGAGGATTCAGAATTGGGACTTGGTGAGACACACTAAGACTCTCGCAGGAGAGTCTGTCATCATCGACGTGGAGGACGAAAGCGGGACTGTCCTTCTCGCTGACGTTCAGCAAAACGAAGACATTAGCTCTCACGTCTCCGCCAACACGAACCCACAATTCCGTGTGCGGATTAGTCGGGAGAACAACGCGAACAATCCCTCCCTCGATGCGGTATTCCGAAGGTGGACGATGCGGCCCGGTGATACTGGTCTAAGTAAGAAAATTCGGAAGAAGCAGGAATCCAGTCGGAATAAAGCAAGACACATCCACACTCGGCTGGCAACGCGCGGAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba2e7bab77dd37ffa049bc744a8f86c2315353a6f01e1c2c0c912d75261b7e12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7174
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Haloviruses HF1 and HF2: evidence for a recent and large recombination event Tang,S.L., Nuttall,S. and Dyall-Smith,M. 2004 15090523 GenBank