Protein

View in Explore
Genbank accession
UYD59315.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLNNTEQHISSKAESVELDPSSTNFPIGTTDVQKMANLIQPHAISSYESMKASTTKMGILRIATEAEVLAGMVTDATVTPATLQAKWIRPDASDTVKGLVRYATVAERAEASASVSIGMNTAGVWDIVRNKSLGTTTKNGSVKLSTTAIGQIGTDNTTVTTPLVVKAMIDTFAITTNPAAATETTNGVVKISPSPVVNAALHVGVAVSPKGFIETRATQTRVGTVKMATQAQANARTATDVALSPATLPIASSSQYGITALLDVAQSGATNKALSAHGAMNFLSKITGGVVSGSITANGVWTNVAQSTDSNALTRKDYVDSRDAFLQTQINNRIVSGSLFKRTNRVLTLLFNYNGGLTSGNFTLNDRWDNYDGIIFEGSGDDQYGFVTKSFDKTELTILQQRVNYFVFSTDGIYWMGKFSSDARTFSTSAENSRMWRVYGYKDVYAEA
Physico‐chemical
properties
protein length:448 AA
molecular weight: 47825,15710 Da
isoelectric point:8,51145
aromaticity:0,07366
hydropathy:-0,12433

Domains

Domains [InterPro]
DC_0176
STR
1–446
DC_0176
UYD59315.1
1 448
Architecture
STR
STR 1-446 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM6
[NCBI] 		3101602 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD59315.1 [NCBI]
Genbank nucleotide accession
OP380601.1 [NCBI]
CDS location
range 99196 -> 100542
strand +
CDS
ATGTTAAACAATACAGAACAACATATCAGTTCTAAAGCGGAATCGGTGGAGCTAGACCCTAGCTCCACTAATTTTCCTATAGGAACTACTGATGTGCAAAAGATGGCAAATCTCATTCAACCACATGCGATTAGTTCATATGAAAGTATGAAAGCCAGCACCACAAAAATGGGTATTTTAAGAATAGCCACCGAGGCGGAAGTATTAGCCGGTATGGTTACTGATGCAACAGTTACTCCCGCAACGCTACAAGCGAAATGGATAAGACCTGATGCATCAGACACAGTGAAGGGTTTGGTTAGATATGCCACGGTTGCGGAAAGAGCTGAAGCGTCTGCTAGTGTTTCTATAGGTATGAATACAGCCGGTGTGTGGGATATCGTAAGGAATAAATCCTTGGGAACTACTACCAAAAATGGATCTGTAAAATTATCTACTACCGCAATCGGGCAAATCGGTACTGATAACACTACAGTAACAACCCCACTTGTAGTAAAGGCGATGATTGATACGTTTGCGATCACTACAAATCCAGCCGCAGCAACAGAAACTACGAATGGAGTTGTTAAAATATCTCCCAGTCCAGTAGTAAACGCCGCCTTACATGTTGGTGTTGCCGTTAGCCCTAAAGGTTTTATAGAAACCAGAGCAACACAAACCCGAGTCGGTACTGTTAAAATGGCTACACAGGCACAAGCAAATGCCCGTACAGCGACTGACGTTGCTCTTAGTCCTGCTACCCTACCCATAGCTTCATCGTCTCAGTACGGCATTACGGCGCTTCTAGACGTGGCCCAATCTGGTGCTACCAATAAAGCTTTATCTGCTCATGGTGCAATGAATTTTCTTTCAAAAATAACTGGTGGTGTGGTATCTGGTAGTATAACTGCAAATGGTGTATGGACTAACGTTGCACAATCGACCGATTCAAATGCGTTGACACGAAAAGACTATGTTGATAGTCGGGATGCGTTTCTTCAAACTCAAATAAATAATAGAATTGTCAGTGGTTCTTTATTTAAAAGAACAAATAGGGTTCTTACCTTACTATTCAATTATAATGGTGGACTTACTTCTGGAAATTTCACTTTGAATGACCGTTGGGATAATTATGATGGTATTATATTTGAGGGGTCTGGGGACGATCAATACGGTTTTGTAACAAAGTCTTTTGATAAAACCGAATTGACTATACTTCAACAAAGAGTGAACTACTTTGTATTTTCAACGGATGGAATATATTGGATGGGTAAATTTAGTTCAGATGCTAGAACATTTTCTACTTCAGCAGAAAACTCAAGGATGTGGAGAGTTTACGGGTATAAGGATGTGTATGCGGAAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87da49fef627b0f5cf7d91e06db2efa53f3dbf5cd7118952991dda35cee83b9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank