Protein

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Genbank accession
YP_003344934.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTAFRLFSRLNTFYGMTGQLLSAGQLKFYDAGTTTPRPVYGDSGLAVNNGVAVRLDSSGRPDVDIWGQGSYFVELFDSLGAKQGEADGVSIPGGGGLTIPTLDSSKFLTNNGAILLWSTIREVPDPVGMGGKVLGTDGENLLWQSLPRPPDPQYTVSTDMLKIGNFMIQWGRDTAPASGKAATLKLVTFPKPFANTPYFVKASVTAALATASSLVAESVSGASTTNATFNFVTADSKERNSDPIISSIPFDWIAFGQGSA
Physico‐chemical
properties
protein length:260 AA
molecular weight: 27421,55320 Da
isoelectric point:4,99276
aromaticity:0,10000
hydropathy:-0,02769

Domains

Domains [InterPro]
DC_2164
STR
5–254
DC_2164
G3DSA:2.60.40.3940
RBD
155–256
G3DSA:2.60.40.3940
IPR054075
RBD
166–256
IPR054075
YP_003344934.1
1 260
Architecture
STR
STR 5-256 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xylella phage Xfas53
[NCBI] 		670252 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xylella fastidiosa subsp. multiplex
[NCBI] 		644357 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xylella > Xylella fastidiosa

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003344934.1 [NCBI]
Genbank nucleotide accession
NC_013599.1 [NCBI]
CDS location
range 34289 -> 35071
strand +
CDS
ATGACCGCCTTCCGCTTATTCTCACGCCTGAACACCTTTTATGGAATGACAGGACAATTACTGTCCGCAGGACAGCTTAAGTTCTATGACGCAGGCACGACAACCCCTCGCCCTGTGTACGGCGATAGCGGATTGGCCGTGAACAACGGTGTTGCGGTTCGGCTGGATAGCTCAGGTCGCCCCGACGTGGATATCTGGGGGCAAGGGTCCTATTTCGTCGAACTCTTTGACAGCCTCGGTGCAAAACAGGGTGAGGCTGACGGGGTATCCATCCCTGGCGGCGGAGGCCTAACCATCCCCACATTGGATTCAAGCAAATTCCTAACCAATAACGGGGCGATATTGCTGTGGTCAACAATTCGGGAAGTCCCTGACCCTGTCGGAATGGGGGGTAAGGTGCTCGGCACCGATGGCGAGAATCTGCTTTGGCAAAGCCTCCCACGCCCTCCGGACCCTCAATACACCGTAAGCACGGATATGTTGAAGATTGGGAATTTTATGATCCAGTGGGGCCGCGATACAGCCCCTGCGAGTGGCAAAGCGGCCACCTTGAAACTGGTGACGTTCCCAAAGCCATTCGCGAATACCCCATATTTCGTAAAAGCCAGTGTCACCGCAGCACTTGCAACAGCCAGCAGCCTCGTTGCAGAAAGCGTGAGCGGTGCGTCAACGACCAACGCAACGTTTAACTTCGTGACCGCAGACAGTAAAGAAAGAAACTCTGACCCCATCATCTCCTCTATTCCTTTTGACTGGATCGCCTTTGGGCAGGGGTCCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3d8af028d0e31faa445e10f8f9ae1cfe12d44fefb6bc5e97c8d0accd830cfb9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8645
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50