Protein

Genbank accession
AFN39127.1 [GenBank]
Protein name
pectin lyase-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTSSLQSRVEKFDQTVTNVDAWARGDANTSVDFGGGPVRSPAKLIADLDKSVNESVNAALNPDIQPVPESLDGTETWSFKKAGAWARARLSDIANFVLSVFTLTVGTATGIIGRTILAELLDLPVSVKRFGAKGNGVRLLDGAVSAGSKAFTSASASFTASDVGKAISVVGAGTGGAVLRTTISAFVSPTAVTLTAAASTAVTGAVATYGADDTTAVQNAVNYCAQPKRTLKLYFPSSIYYLGAEIVSLAPLLVSVVDPSPKNVGEADIGGGSWLFFAHSGKGFSALTTNGNYKGVTFRNIGTFRDQPPPASSWAPYDHDFDFYSDGADDVTYDNVLTANPTRAFCVNRTNNGRATFNVRGDPFKVGISVDRMYDVARFDVHFWSFWKDDPNLLAYKHANLIGILLAKTDNAMMGRIFVIHALSALKVTQSASGTVTKLSVDQMDADICANAITFDSSVNSSSASIGVLKFQSATPSIPGSRMIYVQGTGVQLNIGFANGVQMGREGLRVEGANNIVRVNEFRCQIYDTDGANVPAVYCASGVGNKVFIGGYPDIGAAGGTGGKYGGGGYISVDDWRAWTATPSTSSGVLGTVGAVSGLYKMLNNTVKAEFDVGITTNGTGAGAVLLNYPYGSPSANFIGIGKEKNLNGKAVLVDAGQGTGNIQLRFYDNSYPGADGCRLVGNVEYSISI
Physico‐chemical
properties
protein length:690 AA
molecular weight: 72138,10330 Da
isoelectric point:6,26413
aromaticity:0,09275
hydropathy:0,03043

Domains

Domains [InterPro]
IPR012334
104–374
IPR012334
AFN39127.1
1 690
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepMigl
[NCBI] 		2886899 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFN39127.1 [NCBI]
Genbank nucleotide accession
JX104231 [NCBI]
CDS location
range 35117 -> 37189
strand +
CDS
ATGACCTCATCACTACAAAGCCGCGTCGAGAAGTTCGACCAGACTGTCACGAATGTGGATGCGTGGGCGCGCGGGGATGCGAATACCTCCGTCGACTTTGGCGGCGGCCCGGTCCGCTCGCCGGCAAAGCTGATCGCCGACCTTGATAAGTCGGTCAACGAGTCCGTAAATGCCGCGCTGAACCCCGACATCCAGCCGGTTCCGGAGTCGCTGGATGGTACGGAAACGTGGTCATTCAAGAAGGCTGGCGCTTGGGCGCGCGCGAGGCTGTCGGACATCGCGAACTTCGTTCTGTCGGTTTTCACGCTGACGGTCGGCACGGCAACCGGGATTATCGGCCGAACGATCCTCGCGGAATTGCTGGACCTGCCGGTGAGCGTGAAGCGCTTCGGCGCGAAGGGAAACGGGGTTCGATTGCTGGATGGCGCAGTGTCCGCCGGCTCGAAAGCGTTCACTTCGGCATCGGCGTCGTTCACTGCATCCGACGTTGGCAAGGCCATTTCTGTTGTGGGGGCCGGCACCGGCGGCGCGGTTCTGCGCACCACCATTTCCGCCTTTGTGAGCCCGACTGCCGTCACGCTTACTGCCGCAGCTTCGACGGCCGTGACCGGCGCCGTAGCGACGTATGGCGCCGACGACACCACGGCTGTTCAGAATGCAGTGAACTACTGCGCGCAGCCTAAACGGACGCTCAAGCTCTACTTCCCGTCGTCTATCTACTATCTCGGCGCCGAGATCGTTTCGCTCGCGCCGCTGCTCGTATCGGTTGTCGACCCGAGCCCGAAGAATGTCGGCGAGGCAGACATCGGCGGCGGTTCGTGGCTGTTCTTCGCCCACTCTGGCAAGGGCTTTTCCGCACTCACGACGAACGGGAATTACAAGGGCGTGACGTTCCGAAACATCGGCACGTTCCGCGATCAGCCGCCGCCGGCATCCTCCTGGGCGCCATACGACCACGACTTCGATTTCTATTCTGACGGAGCGGACGATGTGACCTACGACAACGTTCTGACGGCGAATCCGACGCGCGCATTTTGCGTGAACCGCACGAACAACGGGCGCGCGACGTTCAACGTTCGCGGCGACCCGTTTAAGGTCGGAATTTCTGTTGACCGAATGTACGATGTCGCACGGTTTGACGTGCATTTCTGGTCCTTCTGGAAGGATGACCCGAACCTCTTGGCATACAAGCACGCCAACCTGATCGGCATTCTTCTGGCGAAAACCGATAACGCGATGATGGGGCGCATCTTCGTCATCCATGCGCTTTCCGCGCTCAAGGTTACGCAAAGCGCATCCGGCACCGTTACCAAACTGAGTGTCGATCAAATGGACGCTGATATTTGCGCGAACGCGATTACGTTTGACTCCAGCGTAAACAGTTCCAGCGCATCTATTGGCGTGCTGAAGTTTCAAAGCGCTACGCCGTCGATTCCTGGTTCGCGCATGATCTACGTTCAAGGGACCGGCGTTCAGCTTAATATCGGGTTCGCTAACGGCGTGCAGATGGGCCGCGAAGGCCTGCGTGTCGAAGGGGCCAACAATATCGTTCGCGTCAACGAATTCCGCTGCCAGATTTACGACACGGACGGCGCGAACGTTCCCGCCGTGTACTGCGCGAGCGGTGTCGGCAACAAGGTTTTCATCGGTGGATACCCGGACATCGGCGCGGCCGGCGGTACCGGCGGGAAGTATGGTGGCGGCGGTTACATCAGCGTGGATGATTGGCGTGCATGGACCGCGACGCCTTCGACGTCGAGCGGCGTGCTTGGGACGGTAGGCGCAGTGTCCGGGCTGTACAAGATGCTCAACAACACCGTGAAGGCGGAATTCGATGTTGGCATCACGACGAACGGCACGGGCGCCGGCGCGGTCTTGCTGAACTACCCGTATGGCTCGCCGTCTGCGAACTTCATCGGTATCGGCAAGGAGAAGAACCTGAACGGGAAGGCAGTCCTTGTAGATGCCGGCCAGGGCACCGGGAACATTCAGTTGCGGTTCTACGACAACAGCTATCCCGGTGCTGACGGCTGTCGTCTGGTTGGCAACGTGGAATATTCGATCTCGATTTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
34b401ebf759f3159ed700a00ce466418d7254de29720c2676b6cb524d956075
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8728
Evidence 0,8728
Download PDB

Literature

Title Authors Date PMID Source
Complete genome of the Bcep22-like bacteriophage BcepMigl Gill,J.J., Migl,D.M., Summer,E.J., Gonzlaez,C.F. and Young,R. 2014-02-27 — GenBank