Protein
View in Explore- Genbank accession
- AHY26758.1 [GenBank]
- Protein name
- putative tail component
- RBP type
-
TSP
- Protein sequence
-
MENIDYVALSKSRYTDQFDYDPTFNAIVQTLIEYKMRVQGLYINFADTILDIDKSTGKNLDLIGSIVGQERVLVDYYANPFFGFDGNPKAEPFDKGLWYSLFSDSGGDSRILSDEEYRRVIKARIIRNKTNCTRKDFTDIMYLLLGYSSEVPRNYVVSSHEEKVGNPEYVLYQNSKLLNEAYSTGEVTISFDVKVEGGDGGIRVYSSNGNVDWSFTGDVNGVTSTYQRKTITVKPRRVVANNSGISKLEFHAFPTGSKRKVFVKNIKVEIGSKATSWTPAPEDLFQLDSKSHGNIDLTFPKGFSSDFVAYFLSKMDDLDSLIPRPLGYKLNVYIRS
- Physico‐chemical
properties -
protein length: 336 AA molecular weight: 38003,29510 Da isoelectric point: 6,03121 aromaticity: 0,12500 hydropathy: -0,38929
Domains
Domains [InterPro]
IPR021283
TAS
16–148
TAS
16–148
DC_1746
STR
16–314
STR
16–314
1
336
Architecture
STR 16-314 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
336
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 226 | 226 | 0,7225 |
| Central domain | 227 | 325 | 100 | 0,3140 |
| C-terminal | 326 | 336 | 10 | 0,3591 |
Note: Constraints were applied during segmentation.
Fixed 36 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 36 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-226
1-226
Central
227-325
227-325
C-terminal
326-336
326-336
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage vB_AbaM_Acibel004 [NCBI] |
1481186 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Acinetobacter baumannii [NCBI] |
470 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AHY26758.1
[NCBI]
Genbank nucleotide accession
KJ473422
[NCBI]
CDS location
range 91073 -> 92083
strand +
strand +
CDS
ATGGAGAATATTGATTATGTAGCGTTGTCAAAAAGCCGTTACACAGACCAGTTTGACTATGACCCTACATTCAACGCTATTGTCCAGACTCTTATTGAATATAAAATGAGAGTTCAAGGACTCTACATAAATTTTGCTGACACAATTCTTGATATCGACAAGTCTACTGGAAAGAACTTAGACTTGATCGGTTCGATTGTTGGTCAGGAACGTGTTCTGGTAGATTACTATGCAAACCCTTTCTTTGGTTTTGATGGTAATCCAAAGGCAGAACCTTTTGACAAAGGGCTTTGGTACTCATTGTTTAGTGACAGTGGTGGTGATAGTCGTATCTTGTCTGATGAAGAGTACAGAAGAGTTATTAAAGCTCGTATCATTCGTAATAAGACAAACTGCACAAGAAAGGATTTTACAGACATTATGTACCTCCTTCTTGGGTACAGTAGTGAAGTACCTAGAAACTATGTGGTTAGCTCTCATGAGGAAAAGGTTGGAAATCCTGAATATGTTTTATACCAAAACAGTAAACTTTTAAATGAGGCATATTCTACTGGGGAAGTTACTATCAGTTTCGATGTCAAGGTTGAAGGTGGAGATGGTGGTATTAGGGTTTACAGTTCAAATGGTAATGTTGATTGGTCTTTCACAGGTGATGTTAATGGAGTAACTTCAACATACCAAAGGAAGACTATCACAGTTAAGCCTAGAAGAGTTGTAGCGAATAACTCAGGGATTTCTAAATTAGAGTTCCACGCATTTCCAACAGGTTCAAAACGGAAAGTATTTGTTAAAAATATTAAAGTTGAGATTGGATCAAAAGCTACATCATGGACTCCAGCACCAGAGGATTTATTTCAGTTGGATAGCAAGTCTCATGGAAATATTGACTTGACCTTCCCTAAAGGGTTCTCAAGTGATTTTGTTGCATACTTCTTGTCAAAGATGGATGACCTAGACTCACTTATTCCAAGACCACTGGGATACAAATTAAACGTATATATTAGGAGTTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
9d287dc329b757432480121c8e6784483f3de013d7295cac4d6ed17e3b6580d4
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50