Protein

View in Explore

Genbank accession

AYD81319.1 [GenBank]

Protein name

tail spike protein

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,94

Protein sequence

MALPTERTVTGTYVNPVTGEPYDGTNGENYVIFEPIPERWTDKGGNQILLGGGRVNLDVNGTFSETVVCTDATDVLPETGRLWRLRQFVGGAWSEGVFEVPAGTGSLDITDIISVDICGIDYVPVPGAEGPAGPEGPSAYEVAVANGFVGTEAQWLASLEGPQGEPGLSGGMDSGVATGGSMDPNPLNPLAVDINPLKGQIVDYSVEPPVVTPVETTSVITVELDSVAQTRTITWFLMDADLNVYQQADRPSPEERRAFLVLGMVGQHNGSIFLVQTLPTVARQPVNQLYDLMDSIGAFNISGNAVTPNGANLSLDHSSGQVFSRGWNLFDGPVQTHNPHIVTTIGEAPATWVHILRNADVYDPIGTATIDVTHYDNNGVLTPIGGGAGRSVVHRLWILPTSDGAEIHFLQYGQTTYASLDDAVSAAVTENFVANPNLVGNGILLYMLAVTRSATNLSDPTQARLIRVGKFGSGASGGTSVDLSGYAQLTGATFTGQVASEMLADSDIAQSSQTTVNTFDQWRRLVSGEMQWGSGSDPMDSFLKRLGAGLLAFINTDFLVGQEDAKAYRFRQSGASLDLDASGADLFLSVFELVNFLGAQRTYLRLESGSFTAHASGKWVFGDGPFDGTGHTLDGVANQAGFFGVAPVGQQAVTGDRSTGEALQSLLTGLAALGLISDTSTSGPAVVETVNGEAGPAVTLSAADVGAIPTAEKGVASGIATLGLDGLVPSTQLPTPPVTSVNGETGAVSLSAADVGAVPTTEKGAANGVATLDGTGKVPSAQLPTAPVTSVNGETGAVSLSAADVGALDQVTADGLYVAQDSLWINAADHGAVGDGVTDDAPAINSILTTSPAGSVIVLPARVYATGVPIVVPPGKTLMGLRSDLMTATGLYEPNVQIKPLSTFTGVAAIRFLDQTDGGYATISGEQRVLNVTLDGSNIAAGVDGIQAKGNIQNVALRDVTIRRFPNSGIYCGLQGGVAPYSWRMHRVMLDNNHTHGMFGERMVDLTAVDCQAIGNWSNGWMLQNAANSQMVGCRAEWNGNHGFYLSGDWGNGAGSGGMLLSGCSTDRNGFNGVYIDATGTPPIVISNLMTRRDGRNGGTGGGGYAGVAVNAATTPVIIGDWTNFPGVDDGGAATNSPEYGGSFTNSTFVQIDNAYLHAATGGIFDAGNNGEIRLGANITYAVGTTSTFTRSRALVGEITVAAADSASKAEADLICTGTDDHLMIQQAIDLVDSAPGKGRIRLLDGTFNLGATINWPDGVGLGLVGSGWGTVLKLAAGVDDNAITFSGGETRSTFSDFTIDGNHTNQTTGPSGGIWAIGAVECVFQRIHFTACKSTGLVLGAITGPAFGHNNIVTHCLFDNANTSTLEGNGIYMTSNDENFIVACDFQFLGGSGPAMGMIHDAAGTQTILGCNFVNGGNSRPAIRVQDAAATKIVACNFDGVAGDAIFLAAQNCVVEGNTIFGIGAVGTAGAYTGVHLEFGATGNLVSGNSISSHTVNGSAHSLIREESVGSSGSNLIVGNMLITKGTLAVAALDLNAPGTIARSNFGGGADGDPVVTTDQLGAANGVATLDASSEVPLAQLPDLSDLYFPDTWAPEDAGLLAWSSDPAACQSTPAFCGVGVMRVTAVVLHSPKTVGKIVWYAGGYDGGLLTGSWAGIWNSTGTTRLAGVADLSAPGSEPAEVHNAGGAMHYAPLDGGPVSLAAGVYLVAWRHNYTASPADGPQILQYENAFGAPPNVLTFNGIKRFGYNSAPGATLPTTLPTINTDGGNRFWVALAT

Physico‐chemical properties

protein length:	1778 AA
molecular weight:	182881,45680 Da
isoelectric point:	4,45370
aromaticity:	0,07199
hydropathy:	0,05832

Domains

Domains [InterPro]

DC_1109
ATT
1–236

DC_1109 DC_2308 IPR011050 IPR006626 IPR012334

DC_2308
STR
735–862

DC_2308 IPR006626 IPR006626 DC_0770 IPR006626 IPR006626 IPR006626

IPR024535
ENZ
824–973

IPR024535 IPR006626 IPR006626 IPR006626 IPR011050

IPR012334
STR
825–1192

IPR012334 DC_1175

AYD81319.1

1 1778

Architecture

ATT

STR

ATT 1-236 | STR 346-1778

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1109	ATT	DC_1109	1	236	Novel HMM	DC_1109	N-terminal	Low	Positional only	79 proteins / 79 hits
DC_2308	STR	DC_2308	346	737	Novel HMM	DC_2308	Central	Low	Positional only	26 proteins / 26 hits
DC_2308	STR	DC_2308	735	862	Novel HMM	DC_2308	Central	Low	Positional only	26 proteins / 26 hits
IPR011050	STR	IPR011050	818	1115	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR024535	ENZ	DC_0410	824	973	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR012334	STR	IPR012334	825	1192	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	929	950	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	952	974	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_0770	STR	DC_0770	988	1240	Novel HMM	DC_0770	Central	Low	Positional only	74 proteins / 74 hits
IPR006626	Unmapped	-	1026	1048	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1056	1078	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1081	1112	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1147	1168	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	1217	1559	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	1220	1552	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	1290	1319	InterPro	Parallel beta-helix repeat	-	-	-	-
DC_1175	STR	DC_1175	1299	1778	Novel HMM	DC_1175	Central	Low	Positional only	105 proteins / 105 hits
IPR006626	Unmapped	-	1349	1376	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1451	1480	InterPro	Parallel beta-helix repeat	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AYD81319.1

1 1778

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	839	839	0,7093
Central domain	840	1563	725	0,9610
C-terminal	1564	1778	214	0,8721

Note: Constraints were applied during segmentation.
Fixed 218 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-839

Central
840-1563

C-terminal
1564-1778

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptomyces phage JustBecause [NCBI]	2315618	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

AYD81319.1 [NCBI]

Genbank nucleotide accession

MH744418.1 [NCBI]

CDS location

range 94174 -> 99510
strand -

CDS

ATGGCTCTGCCCACGGAACGTACCGTCACCGGTACCTACGTGAACCCGGTGACGGGCGAACCGTATGACGGAACGAACGGCGAGAACTACGTCATCTTCGAGCCGATTCCCGAACGCTGGACCGACAAGGGCGGAAACCAGATTCTGCTCGGCGGCGGCCGGGTGAATCTCGACGTCAACGGCACCTTCTCCGAGACGGTCGTGTGCACCGACGCTACTGACGTCCTTCCCGAGACCGGCCGCCTGTGGCGTCTGCGGCAGTTCGTCGGCGGAGCCTGGAGTGAAGGCGTCTTCGAGGTTCCCGCAGGTACCGGATCGCTCGACATCACCGACATCATCTCCGTCGACATCTGTGGCATCGACTACGTCCCCGTCCCGGGCGCCGAGGGCCCCGCCGGGCCAGAGGGTCCCTCGGCCTACGAGGTGGCCGTCGCGAACGGCTTCGTCGGAACGGAAGCCCAGTGGCTCGCCTCGCTGGAGGGTCCGCAGGGTGAGCCCGGCCTGAGCGGAGGCATGGACTCCGGTGTGGCGACCGGCGGCTCGATGGACCCCAACCCGCTCAACCCGCTGGCCGTCGACATCAACCCGCTGAAGGGCCAGATCGTCGACTACAGCGTGGAGCCCCCCGTTGTCACGCCAGTCGAGACGACCAGCGTCATCACGGTCGAGCTGGATTCGGTGGCGCAGACGCGCACCATCACCTGGTTCCTGATGGACGCCGACCTCAACGTCTACCAGCAGGCCGACCGGCCCAGCCCGGAAGAGCGCAGGGCGTTCCTCGTGCTCGGTATGGTCGGCCAGCACAACGGTTCGATCTTCCTGGTACAGACCCTCCCGACGGTCGCTCGGCAGCCGGTCAACCAGCTCTACGACCTGATGGATTCGATCGGTGCCTTCAACATCTCGGGCAATGCGGTCACGCCGAACGGTGCGAACCTCTCCCTGGATCACTCCAGCGGGCAGGTGTTCTCGCGCGGCTGGAATCTCTTCGACGGTCCCGTTCAGACGCACAACCCACACATCGTCACTACCATCGGCGAGGCCCCGGCCACCTGGGTTCACATCCTGCGCAACGCCGACGTCTACGACCCGATCGGAACCGCGACGATCGACGTCACCCATTACGACAACAACGGTGTGCTCACGCCGATCGGGGGCGGTGCGGGGCGCAGCGTCGTGCACCGGCTGTGGATCCTCCCCACCAGCGACGGCGCGGAGATCCACTTCCTCCAGTACGGCCAGACCACCTACGCCTCGCTCGACGACGCGGTTTCGGCCGCCGTCACCGAGAACTTCGTCGCCAACCCCAACCTCGTCGGCAACGGCATCCTGCTCTACATGCTGGCCGTCACGCGGAGTGCGACGAACCTCTCCGACCCGACTCAGGCGCGTCTCATCCGGGTCGGCAAGTTCGGCTCGGGCGCCAGCGGCGGCACCTCCGTCGACCTGAGCGGTTACGCCCAGCTCACGGGCGCCACCTTCACGGGTCAGGTTGCCTCCGAGATGCTGGCCGACTCCGACATCGCCCAGTCGTCGCAGACGACCGTCAACACCTTCGACCAGTGGCGCCGCCTGGTCAGCGGTGAGATGCAGTGGGGCTCCGGCTCCGATCCGATGGATTCTTTCCTGAAGCGGCTCGGCGCAGGTCTTCTCGCCTTCATCAACACCGACTTCCTGGTGGGTCAGGAAGATGCCAAGGCGTACCGCTTCCGGCAGTCCGGCGCGTCGCTCGACCTCGACGCTTCGGGCGCCGACCTGTTCCTCTCGGTGTTCGAGCTGGTCAACTTCCTGGGCGCCCAGCGGACCTACCTCCGTCTGGAGTCCGGCTCCTTCACCGCGCACGCGAGCGGGAAGTGGGTGTTCGGTGACGGCCCGTTCGACGGAACGGGCCACACTCTGGACGGCGTCGCCAACCAGGCTGGCTTCTTCGGTGTCGCCCCGGTTGGCCAGCAGGCGGTCACGGGCGACAGGTCCACCGGGGAAGCCCTCCAGAGCCTCCTGACGGGCCTTGCGGCACTCGGTCTGATCTCCGACACCTCGACGTCCGGACCGGCCGTCGTGGAGACCGTGAACGGCGAGGCAGGGCCCGCCGTAACCCTCTCGGCCGCCGACGTCGGAGCGATCCCCACCGCTGAGAAGGGCGTGGCCAGCGGCATTGCCACGCTCGGGCTCGACGGCCTGGTGCCGTCCACCCAGCTCCCCACCCCTCCGGTCACCTCGGTCAACGGCGAGACGGGGGCCGTCAGCCTGAGCGCGGCCGACGTCGGGGCTGTCCCGACGACGGAGAAGGGCGCCGCGAACGGCGTGGCCACCCTCGACGGAACCGGCAAGGTCCCCTCCGCCCAGCTCCCCACGGCGCCCGTCACCTCCGTGAACGGTGAGACCGGCGCAGTTTCTCTCTCTGCTGCCGACGTCGGGGCGCTCGACCAGGTCACGGCGGACGGCCTCTACGTGGCGCAGGACTCCCTGTGGATCAACGCGGCCGACCACGGGGCGGTGGGAGACGGGGTGACCGACGACGCCCCGGCCATCAACTCCATCCTGACCACCTCTCCGGCTGGAAGTGTCATCGTTCTCCCGGCCCGCGTCTACGCCACGGGCGTTCCCATCGTCGTCCCGCCGGGCAAGACGCTGATGGGTCTGCGCTCGGACCTGATGACGGCCACGGGTCTCTACGAACCCAATGTCCAGATCAAGCCCCTGTCCACCTTCACGGGCGTTGCGGCCATCCGGTTCCTCGATCAGACGGATGGCGGATACGCGACGATCTCCGGCGAGCAGCGCGTTCTGAACGTCACGCTCGACGGAAGCAACATCGCTGCCGGAGTCGACGGCATTCAGGCCAAGGGGAACATTCAGAACGTCGCGCTCCGGGATGTCACGATCCGGCGCTTTCCGAATTCCGGCATCTACTGCGGACTCCAGGGCGGCGTGGCCCCCTACTCCTGGCGCATGCACCGCGTCATGCTCGACAACAACCACACGCATGGCATGTTCGGCGAGCGCATGGTCGACCTCACGGCCGTGGACTGCCAGGCGATCGGCAACTGGTCCAACGGCTGGATGCTCCAGAATGCGGCGAACTCGCAGATGGTGGGATGCCGTGCCGAATGGAACGGAAATCATGGCTTCTACCTGAGTGGCGACTGGGGCAACGGCGCCGGATCGGGCGGCATGCTGCTGTCGGGCTGCTCGACCGACCGCAACGGATTCAACGGCGTCTACATCGACGCGACGGGAACCCCGCCCATCGTCATCTCGAACCTGATGACCCGGCGCGACGGCCGCAACGGCGGAACCGGCGGCGGCGGATACGCGGGCGTGGCCGTGAACGCTGCCACCACCCCGGTCATCATCGGCGACTGGACCAACTTCCCCGGCGTGGACGACGGCGGCGCCGCGACGAACTCCCCCGAGTACGGCGGCTCCTTCACCAACAGCACCTTCGTACAGATCGACAACGCCTACCTGCACGCAGCGACCGGCGGCATCTTCGACGCGGGGAACAACGGGGAGATCCGCCTGGGGGCGAACATCACCTACGCCGTCGGCACCACGAGCACCTTCACCAGGAGCAGGGCGCTCGTCGGAGAGATCACCGTTGCCGCAGCCGACTCCGCATCGAAGGCGGAAGCGGACCTGATCTGCACCGGAACCGATGACCACCTCATGATCCAGCAGGCCATCGACCTGGTCGACTCCGCCCCCGGGAAGGGCCGCATCCGCCTGCTCGACGGCACGTTCAACCTGGGCGCCACGATCAACTGGCCGGACGGGGTCGGGCTGGGCCTGGTGGGGTCGGGCTGGGGAACCGTGCTGAAGCTGGCCGCCGGAGTCGACGACAACGCGATCACTTTCTCCGGCGGCGAGACGCGCTCGACCTTCTCCGACTTCACCATCGACGGCAACCACACCAACCAGACGACCGGCCCGAGCGGCGGCATCTGGGCCATCGGCGCCGTCGAGTGCGTGTTCCAGCGGATCCACTTCACCGCCTGCAAGAGCACCGGCCTGGTCCTCGGTGCCATCACCGGCCCGGCGTTCGGCCACAACAACATCGTCACGCACTGCTTGTTCGACAACGCGAACACCTCCACCCTGGAGGGCAACGGCATCTACATGACGTCGAACGACGAGAACTTCATCGTGGCCTGCGACTTCCAGTTCCTTGGGGGGTCAGGCCCGGCGATGGGCATGATCCATGACGCCGCCGGAACGCAGACGATTCTCGGCTGCAACTTCGTGAACGGTGGCAACAGCCGACCTGCCATCCGCGTGCAGGACGCTGCGGCAACGAAGATCGTGGCCTGCAACTTCGACGGTGTGGCGGGTGACGCGATCTTCCTTGCCGCCCAGAACTGCGTGGTCGAGGGCAACACCATCTTCGGCATCGGAGCCGTCGGTACGGCCGGTGCCTACACGGGTGTCCACCTGGAATTCGGGGCCACCGGCAACCTGGTATCCGGCAACTCGATCTCCTCTCACACCGTCAACGGATCCGCGCACTCCCTGATCCGCGAGGAATCGGTCGGCAGCTCGGGCAGCAACCTGATCGTCGGCAACATGCTCATCACCAAGGGCACCCTCGCGGTCGCCGCGCTCGACCTGAACGCCCCCGGCACGATCGCCAGGAGCAACTTCGGGGGCGGCGCCGACGGTGATCCCGTCGTCACCACGGACCAGCTCGGCGCGGCCAACGGTGTCGCCACGCTTGACGCCTCCAGCGAGGTGCCCCTGGCGCAGCTTCCCGACCTCAGTGATCTGTATTTCCCTGACACCTGGGCGCCCGAGGACGCGGGTCTTCTTGCCTGGTCGTCGGACCCCGCAGCGTGCCAGTCGACTCCGGCCTTCTGCGGTGTTGGCGTCATGCGCGTCACGGCTGTCGTACTGCACAGTCCGAAGACCGTGGGGAAGATCGTCTGGTATGCGGGCGGTTACGACGGCGGCCTGCTGACCGGATCCTGGGCGGGTATCTGGAACTCCACCGGAACGACCCGGCTGGCCGGGGTGGCGGACCTCTCCGCACCCGGAAGCGAGCCCGCCGAGGTGCACAACGCGGGCGGCGCCATGCACTACGCGCCCCTGGATGGCGGACCCGTCTCACTGGCTGCCGGTGTCTACCTGGTGGCCTGGCGGCACAACTACACCGCGTCCCCGGCAGACGGGCCGCAGATCCTCCAGTACGAGAACGCTTTCGGCGCACCGCCGAACGTGCTCACCTTCAACGGCATCAAGCGCTTCGGCTACAACTCGGCGCCCGGGGCGACCCTCCCCACTACCCTCCCGACCATCAACACCGACGGAGGTAACAGGTTCTGGGTGGCGCTTGCCACGTAG

Genome Context

Tertiary structure

PDB ID

e3137e2d585899b3585861bd31595544336fab53e45280eb688f36d01c41e539

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7885

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence