Protein

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Genbank accession
AAM83083.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTFSVNYNGVELSELVSGFTAIDRGFGSVWNNTLSNQVARYGQSFVKNTLSAKKITITIRKSGIPSDWIALRKELAKVLDVNEPAPLIFGDEPNKVWYAVADGTQALSEDISNLVATGTLTFIVPEGHAYSTYTNVLNSDNSGGVNGSITPNADGSVDITINNQGTLPTWIDLKLTNNHDNGYFGIAGVNGSLELGNREEVDGVTIKHSDILYDSKTDPKFSKFVSAAGQPHPEWAGAGTNGTIGYQEYNYKSSNGQQKTMKGVKLIDPGSQTGFRGGMTELVLPPDSNGDSGAVNFYAWFRLFTWTTVLGQTGVMQILFTDENDNFVAGYGTLKDDKTGNIGTVGFWIGGPNKGQWKHIPYVANNGEQTGLKDNNTMLNDNRGQLDFAKQGATLGFYWKGGHQTIVVPELKDVAIHKVKFFFGNWSTNPRGTMTHMVIRDFWCRKDFVNTWNDLPNRYKNGSVVEIDMASGNVSKDGISAITEVVNGTEPFNIPPGISQIKIIQSSWNNTPPDVEISWKERIL
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57341,34410 Da
isoelectric point:5,47976
aromaticity:0,10305
hydropathy:-0,37118

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–130
G3DSA:2.40.30.200
DC_0420
STR
1–524
DC_0420
IPR006520
Unmapped
5–130
IPR006520
IPR008841
STR
34–124
IPR008841
AAM83083.1
1 524
Architecture
ATT
STR
ATT 1-130 | STR 131-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAM83083.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,7569
Central domain 270 468 200 0,0734
C-terminal 469 524 55 0,1003
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-468
C-terminal
469-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 4268
[NCBI] 		201847 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAM83083.1 [NCBI]
Genbank nucleotide accession
AF489521 [NCBI]
CDS location
range 28194 -> 29768
strand +
CDS
ATGACATTTTCAGTTAATTACAATGGTGTTGAACTATCTGAATTAGTAAGTGGATTCACAGCAATTGATAGAGGGTTTGGTTCAGTTTGGAATAATACACTATCAAATCAAGTAGCTAGATATGGTCAATCATTTGTAAAGAATACATTAAGCGCAAAAAAAATTACTATTACCATTAGAAAAAGCGGAATTCCAAGTGATTGGATAGCCTTAAGAAAAGAATTAGCAAAGGTGCTGGACGTCAATGAACCAGCGCCTTTAATTTTTGGTGATGAGCCTAATAAAGTTTGGTATGCAGTAGCAGATGGAACTCAAGCCTTATCAGAAGATATCTCTAACTTAGTTGCTACTGGAACTCTTACATTTATAGTCCCAGAAGGGCACGCTTATTCGACATATACTAATGTTTTAAACTCAGATAATTCAGGTGGAGTCAATGGTTCTATCACTCCTAATGCTGATGGTTCGGTTGATATCACAATTAATAATCAAGGAACATTACCGACTTGGATTGATTTAAAGCTTACCAATAATCATGACAATGGGTATTTTGGTATTGCTGGGGTTAACGGAAGCTTAGAATTAGGTAATCGAGAAGAAGTTGATGGTGTTACTATCAAGCATAGCGATATTCTTTATGATAGTAAAACTGATCCTAAATTTTCTAAATTTGTATCAGCCGCAGGTCAACCCCATCCAGAATGGGCTGGTGCAGGAACAAATGGAACAATTGGGTATCAAGAATATAATTATAAGTCTTCCAATGGGCAACAGAAAACAATGAAGGGTGTTAAGTTGATTGATCCTGGAAGTCAGACAGGATTTCGTGGGGGCATGACAGAGCTTGTGTTACCACCAGATTCAAATGGGGATTCTGGTGCAGTTAATTTCTATGCTTGGTTCAGATTATTTACTTGGACAACTGTTCTCGGCCAAACTGGGGTGATGCAAATTCTATTCACTGATGAAAATGATAATTTTGTGGCTGGTTATGGGACATTAAAGGATGATAAAACAGGAAATATTGGGACTGTTGGATTTTGGATTGGCGGACCTAACAAAGGGCAATGGAAACATATTCCTTATGTCGCAAATAATGGAGAACAAACTGGATTAAAAGATAATAATACGATGCTTAATGATAATCGAGGGCAATTAGACTTCGCTAAACAAGGAGCAACTCTTGGTTTTTATTGGAAAGGTGGCCATCAAACAATTGTAGTTCCAGAACTTAAAGATGTCGCAATTCATAAGGTTAAGTTCTTCTTTGGGAACTGGTCAACTAACCCAAGAGGAACGATGACACATATGGTTATTCGTGACTTTTGGTGCCGCAAAGACTTTGTTAATACATGGAATGACTTACCAAATCGCTATAAAAATGGCTCAGTCGTTGAAATTGATATGGCTAGTGGTAATGTATCCAAAGATGGAATATCAGCCATTACAGAGGTAGTAAATGGAACAGAACCTTTCAATATTCCACCTGGAATTAGTCAGATCAAAATCATTCAATCATCTTGGAATAATACACCACCAGACGTTGAAATATCATGGAAAGAAAGGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d667ffd4991016a8f79e62dfde9fc8134951ce4365aa992944072381b55c83ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8507
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of the obligately lytic bacteriophage 4268 of Lactococcus lactis provides insight into its adaptable nature Trotter,M., McAuliffe,O., Callanan,M., Edwards,R., Fitzgerald,G.F., Coffey,A. and Ross,R.P. 2006 16325353 GenBank
Sequence analysis of an obligately lytic P335 bacteriophage 4268 Trotter,M., Ross,R.P., Fitzgerald,G. and Coffey,A. 2006-01 — GenBank