Protein

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Genbank accession
YP_007674368.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MADKTRRTGDLVSDNNIFVDIVNDRVGIGTIVPTAQLTVAGDVNLTTGIITATSGIVTYYGDGQYLTNLTGAANGTYGDASNVAQIVVDADGRITGISSVTISGGGGGGSGTFDTGITTSVYISVTGGIGTAQAGLSTVAANNDIFIGPGIATQFPSTAGKSYVIESIHVTNIYNTNLYFTSRHDFNGGQNVPTTQRVVVPYQGSLELLEEPIIAKPSDVLSFQALNGVGTTATGVNNGLDSFIIYSEKTDTDYIGTGVTVTTPAGTEMFTSNTNPSVIQSIRLCNYDLNIDVDASVSIYRGGSVGGILTTGVRQGYLVYNMTVPKNSVIEILERPKYLAANDTIVVGIAGTTLTDSLSATLSGKYIT
Physico‐chemical
properties
protein length:368 AA
molecular weight: 38113,99870 Da
isoelectric point:4,40590
aromaticity:0,07065
hydropathy:0,12500

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SKS1
[NCBI] 		754042 Uroviricota > Caudoviricetes > Llyrvirus >
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007674368.1 [NCBI]
Genbank nucleotide accession
NC_020851 [NCBI]
CDS location
range 1870 -> 2976
strand -
CDS
ATGGCAGATAAAACAAGACGAACTGGTGATTTAGTATCTGATAATAATATATTTGTAGATATTGTTAATGATCGTGTTGGTATTGGAACAATAGTTCCAACAGCACAACTAACTGTTGCTGGTGATGTTAATTTAACTACTGGTATTATCACTGCCACTTCTGGTATCGTTACTTATTATGGTGATGGTCAATATCTAACTAATTTAACCGGTGCTGCTAATGGTACTTATGGTGATGCATCAAATGTTGCTCAAATCGTAGTAGATGCTGATGGCAGAATTACTGGTATCAGTAGTGTTACTATTTCTGGTGGTGGTGGAGGTGGTTCAGGAACTTTTGATACTGGAATTACAACATCAGTTTATATTTCAGTTACTGGTGGTATTGGAACTGCACAAGCAGGACTTTCTACAGTTGCAGCAAATAATGACATCTTTATTGGTCCTGGAATTGCAACGCAATTCCCATCAACTGCAGGTAAGAGTTATGTAATTGAGTCTATTCATGTAACGAACATTTATAATACAAATCTTTATTTCACATCAAGACATGATTTTAATGGCGGACAAAATGTTCCGACTACACAAAGAGTTGTAGTTCCTTATCAAGGTTCTTTGGAACTTTTAGAAGAACCAATTATTGCAAAACCATCAGATGTTTTAAGTTTCCAAGCACTTAATGGAGTAGGAACAACGGCAACAGGAGTTAATAATGGATTGGATTCCTTCATAATCTATTCCGAAAAAACTGATACTGATTACATTGGAACTGGAGTAACAGTTACTACACCAGCCGGAACAGAAATGTTCACATCAAATACAAATCCATCAGTTATTCAATCAATTCGATTGTGTAATTATGATTTAAATATTGATGTTGATGCATCAGTATCTATCTATCGTGGAGGAAGTGTTGGAGGTATTCTGACTACAGGTGTTAGACAGGGATACTTAGTATATAATATGACAGTACCTAAGAATAGTGTTATTGAGATTTTGGAAAGACCAAAGTATCTTGCGGCAAATGATACTATTGTCGTAGGTATTGCCGGAACCACTCTTACGGATAGTCTTTCTGCTACTTTATCGGGTAAATATATAACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
79127979b83c1bd1f7f5761c3100c70e10b0a1dec6f2d6503ee74b9d1eaffcba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6994
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-SKS1 Henn,M.R., Clokie,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank