Protein

View in Explore
Genbank accession
XZF38990.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIKNDFNQPKGSTIGVLKDGRTIQEAIDDLYVFKDSQGFINVDMQTGTTLEEKLRNSFTIANTLLVGVRLTAGKVYPLTGTTPLEVNLAKFSLFTSGGRATIDASEFTGPTALWIHATGSYPTPMYRNTTNYMESIELVGGLKAGVDGWTWGNRGMTTGTEYNGQCIIRGCSVYKFDNCIKCTDSSWRYKVSDCMISTGITSVFNAPAGLIDSGESITFSDTQFSDSNGAKFIIACANFSVGMSGTSVLNTPVVISGNGASLLIDGMGNNENPGKSSWMRYVEVTGIGARFILQSSTLVCNGPSSQTRPLVLVGARARAIFIAVKFPGNLYMFHVNNPEKVRTFCEGEGIVKTIACTYDIESGAGNIPVHRSLNRFYNNGFEQDLAGWALNVGGDPAQTATIVTDDTNSGGKAVKVTSLDGKSVFLTQNVRVSSGEEFASFVAYKVNKAASGSTPGNLTVTFKLENGTTIGAGSTSNFSNTVGAWQQGGLFCRGVAPVGAVSAEISLRVRDGAEVILDDVIVNFL
Physico‐chemical
properties
protein length:525 AA
molecular weight: 55881,41660 Da
isoelectric point:5,81306
aromaticity:0,08952
hydropathy:-0,01981

Domains

Domains [InterPro]
DC_1550
ATT
2–40
DC_1550 DC_0903
G3DSA:2.60.120.260
STR
373–523
G3DSA:2.60.120.260
IPR008979
STR
375–524
IPR008979
XZF38990.1
1 525
Architecture
ATT
STR
ATT 2-40 | STR 41-524 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZF38990.1
1 525
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,9696
Central domain 49 371 324 0,9921
C-terminal 372 525 153 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-371
C-terminal
372-525

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RCIP0210
[NCBI] 		3448821 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZF38990.1 [NCBI]
Genbank nucleotide accession
PV854176 [NCBI]
CDS location
range 37038 -> 38615
strand +
CDS
ATGATAAAGAACGATTTTAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAAGAGGCTATTGACGACTTGTATGTGTTTAAGGATTCTCAAGGATTCATAAACGTGGACATGCAGACTGGTACCACCCTTGAGGAGAAGCTGCGCAATTCCTTTACGATAGCCAATACGCTACTTGTGGGCGTACGCCTGACGGCTGGTAAGGTATACCCGCTGACTGGCACAACTCCGCTTGAGGTTAACCTAGCGAAGTTCTCACTGTTCACTTCAGGTGGCCGCGCTACAATCGACGCCTCAGAGTTCACTGGGCCGACTGCATTGTGGATTCACGCCACTGGCTCCTATCCGACCCCAATGTATCGAAACACGACCAACTACATGGAGTCCATCGAGCTTGTGGGTGGGCTTAAGGCTGGCGTCGATGGGTGGACTTGGGGTAACCGTGGGATGACCACCGGAACCGAGTACAACGGTCAGTGTATAATCCGTGGGTGCAGCGTCTACAAGTTCGACAACTGCATCAAATGTACTGACTCGTCTTGGCGCTACAAGGTATCTGACTGCATGATTTCTACCGGAATCACCTCTGTGTTCAACGCCCCTGCTGGGCTGATTGACTCCGGCGAGTCCATAACCTTCAGCGACACTCAGTTCTCCGACTCGAACGGGGCTAAGTTCATCATTGCGTGTGCAAACTTCAGTGTAGGCATGTCTGGCACAAGTGTGCTCAATACCCCGGTTGTTATCTCTGGGAATGGTGCTTCACTGCTCATCGACGGCATGGGGAACAACGAGAACCCCGGTAAAAGTTCTTGGATGCGCTACGTCGAGGTGACTGGAATCGGAGCACGCTTCATCCTACAGTCCTCAACGCTCGTGTGTAACGGCCCATCTTCTCAGACCAGACCGCTTGTGCTTGTTGGGGCGAGAGCTCGCGCAATCTTCATTGCCGTCAAGTTCCCCGGTAACCTCTATATGTTCCATGTGAATAACCCAGAGAAGGTGCGAACATTCTGTGAAGGCGAGGGTATCGTTAAGACCATAGCGTGTACATACGACATTGAATCGGGGGCTGGTAACATTCCAGTCCACCGCTCGCTTAACCGATTCTACAATAACGGGTTCGAGCAGGACTTGGCTGGATGGGCGCTTAACGTTGGTGGCGACCCAGCACAGACGGCTACAATCGTCACGGATGATACCAACAGCGGTGGTAAGGCAGTTAAGGTTACCTCTCTGGATGGTAAGAGTGTGTTCCTTACCCAGAATGTCAGAGTGTCTTCTGGAGAGGAGTTCGCATCCTTCGTGGCCTACAAGGTCAATAAGGCGGCATCCGGCTCAACACCGGGTAACCTGACAGTAACCTTTAAGTTAGAGAACGGTACCACTATCGGTGCGGGCTCGACGTCTAACTTCTCGAACACTGTTGGGGCGTGGCAGCAAGGTGGCCTGTTCTGCCGAGGCGTTGCCCCAGTAGGTGCTGTATCCGCTGAGATATCTCTCCGTGTTCGTGATGGTGCTGAGGTTATCCTTGATGACGTTATCGTAAACTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16f8a2567723fff387f117f7c0b413b50081ba6c99a02325fc86b61c2e5eb618
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50