Protein

View in Explore
Genbank accession
CAB4124396.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
GTQGTIGTQGTTGSQGLAGTQGTVGSQGLAGTQGTIGSQGTIGSQGLVGTQGTIGTQGTIGSQGLAGTQGTIGTQGLVGTQGTIGTQGTIGTQGTIGSQGLAGTQGTIGTQGLAGTQGTIGTQGLAGTQGTIGTQGTIGSQGLAGTQGTIGSQGLAGTQGTVGSQGTIGSQGLVGTQGTIGSQGLAGTQGTIGSQGLVGTQGTIGSQGLAGTQGTIGSQGLAGTQGTIGSQGSIGVQGLVGTQGTLGTKGDTGSFGGASFDYTFLTNTANTDPASGNTKFNNTTLTSATEFYIDYNDRLGANSFNYLQTIDDSTSAIKGTFKVANTANVNEYIYYSITGPHWHDTSGSPTSSYFAVPIASLNSTLVSAAFPDTTNVIVTFVRTGDKGDQGIQGLNGSQGLAGTQGTIGSQGTIGSQGTVGPQGTSGSQGTIGSQGIIGTQGSIGSQGLAGTQGTIGSQGTIGSQGAIGSQGLAGTQGTIGSQGTIGPQGAIGSQGLAGTQGSIGSQGTIGAQGLSGTQGTIGSQGTIGSQGLAGTQGTIGSQGTVGAQGTIGAQGTIGAQGTIGAQGLSGTQGTIGSQGLSGTQGALGTQGSIGAQGLSGTQGTVGAQGLAGTQGALGTQGTIGSQGLAGTQGALGTQGTIGSQGLAGTQGALGTQGTVGSQGLSGTQGTVGAQGLAGTQGALGTQGTIGTGTQGTVGSQGLSGTQGTSGTQGSIGSQGTIGSQGTVGAGTQGTVGSQGLAGTQGTVGAQGLAGTQGALGTQGTIGTGTQGTVGAQGLAGTQGALGTQGTVGAQGTIGTGTQGTIGSQGTIGTGTQGTIGSQGLAGTQGTIGSQGTIGTGTQGTIGSQGLAGTQGTIGSQGLAGTQGTIGSQGTIGTGTQGTIGSQGTIGSQGLAGTQGTIGSQGTVGSQGLAGTQGTIGAQGLAGTQGTIGAQGLAGTQGIVGSQGTIGSQGTVGSQGLAGTQGSIGSQGLAGTQGSIGSQGTIGTGTQGTIGSQGTVGTGTQGTIGSQGTVGTGTQGTIGSQGTIGSQGLAGTQGTIGSQGTIGTGTQGTIGSQGLAGTQGALGTQGTTGAGTQGTIGSQGPVYNIASVSTANTADGAGNTYTLLGNTTTVGSIVTVDGVVLVPNTDYTITGNINLKLLFVPTINSIVETRSLNGQIGSQGLSGTQGSLGTQGTVGAGSQGTIGSQGLSGTQGSLGTQGTVGAGSQGTIGSQGLSGTQGTIGSQGLSGTQGTIGSQGTIGSQGLAGTQGTIGSQGLSGTQGTIGSQGLSGTQGTIGSQGTIGSQGLSGTQGTIGSQGTVGAGTQGAVGSQGAIGSQGTFGTQGTLGTQGILGSGSQGVQGTSGAGGGGTPGGANTQIQFNNAGAFGGTANLTWNVASSLLSIDGNVRIANSGNLVFGGSQANTVANSHFSITYNPATSSLDFTFLG
Physico‐chemical
properties
protein length:1428 AA
molecular weight: 131827,26270 Da
isoelectric point:4,45842
aromaticity:0,02241
hydropathy:-0,09944

Domains

Domains [InterPro]
IPR008160
STR
1–58
IPR008160 DC_0656 IPR008160 DC_1266 IPR050938 DC_0620
IPR008160
STR
193–251
IPR008160 DC_0656 IPR008160
CAB4124396.1
1 1428
Architecture
STR
STR
STR
STR
STR 1-58 | STR 185-442 | STR 462-539 | STR 1205-1300 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4124396.1 [NCBI]
Genbank nucleotide accession
LR796178 [NCBI]
CDS location
range 188828 -> 193114
strand -
CDS
GGAACTCAAGGAACGATTGGGACACAAGGAACGACAGGATCACAAGGTCTAGCTGGAACACAAGGAACAGTTGGGTCACAAGGATTAGCTGGAACTCAAGGAACGATAGGTTCCCAGGGAACAATTGGATCTCAAGGATTAGTTGGAACACAAGGAACGATTGGGACACAAGGAACCATAGGATCACAAGGTCTAGCTGGAACTCAAGGAACGATTGGAACTCAAGGATTAGTTGGAACACAAGGAACGATTGGGACACAAGGAACGATAGGGACACAAGGAACGATAGGTTCCCAGGGTCTAGCTGGAACACAAGGAACGATTGGAACTCAAGGATTAGCTGGAACTCAAGGAACGATTGGGACACAAGGTCTAGCTGGAACTCAAGGAACGATTGGGACACAAGGAACCATAGGATCACAAGGTCTAGCTGGAACACAAGGAACCATAGGATCACAAGGTCTAGCTGGAACTCAAGGAACAGTTGGATCACAGGGAACGATTGGGTCGCAAGGTTTAGTTGGAACTCAAGGAACGATAGGTTCCCAGGGTCTAGCTGGAACACAAGGAACGATTGGGTCGCAAGGTTTAGTTGGAACTCAAGGAACGATAGGTTCCCAGGGTCTAGCTGGAACACAAGGAACGATTGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACCATTGGGTCGCAAGGATCTATTGGAGTACAGGGATTAGTTGGAACTCAAGGAACACTGGGGACTAAAGGTGATACTGGGTCATTTGGTGGTGCAAGTTTCGACTATACGTTCTTAACTAATACAGCAAATACTGATCCAGCTTCAGGTAACACTAAATTTAACAACACTACATTAACTAGTGCAACTGAATTCTATATTGACTACAATGATCGGTTAGGCGCAAATTCATTCAATTATCTACAGACAATCGATGATTCTACATCTGCAATTAAGGGAACATTTAAAGTTGCAAATACTGCTAATGTTAATGAATATATCTATTATAGTATAACTGGTCCTCATTGGCACGATACTAGTGGCTCACCAACTAGCTCATATTTTGCTGTCCCTATTGCAAGCCTTAATTCGACGTTAGTTTCAGCAGCATTTCCAGATACTACTAATGTTATTGTAACTTTTGTTAGAACTGGAGATAAGGGCGATCAGGGTATTCAAGGTCTTAATGGATCACAAGGTCTAGCTGGAACTCAGGGAACGATTGGTTCACAAGGTACAATCGGTTCACAAGGAACTGTTGGGCCACAAGGAACATCAGGTAGTCAAGGAACTATTGGGTCACAAGGAATAATTGGAACCCAAGGGTCTATTGGATCACAAGGTCTAGCTGGAACTCAGGGAACGATTGGTTCACAAGGTACAATCGGTTCACAGGGCGCAATAGGATCACAAGGTCTAGCTGGAACTCAGGGAACGATTGGTTCACAAGGTACAATCGGTCCACAGGGCGCAATAGGATCACAAGGTCTAGCTGGAACCCAAGGGTCTATTGGGTCACAAGGAACAATTGGGGCACAGGGTCTTTCTGGAACTCAGGGAACTATTGGGTCACAAGGAACAATTGGGTCACAAGGATTAGCTGGAACTCAGGGAACGATTGGTTCACAAGGAACTGTTGGGGCACAAGGAACAATTGGGGCACAAGGAACAATTGGGGCACAAGGAACAATTGGGGCACAGGGTCTTTCTGGAACTCAGGGAACCATAGGATCACAAGGTCTATCAGGAACCCAAGGCGCATTAGGCACTCAAGGGTCTATTGGGGCGCAGGGTCTTTCTGGAACCCAGGGAACTGTTGGGGCACAGGGTCTAGCTGGAACTCAGGGAGCATTAGGCACTCAGGGAACCATAGGATCACAAGGTCTAGCTGGAACTCAGGGAGCATTAGGCACTCAGGGAACCATAGGATCACAAGGTCTAGCTGGAACTCAGGGAGCATTAGGCACTCAAGGAACTGTTGGTTCACAAGGTCTTTCTGGAACCCAGGGAACTGTTGGGGCACAGGGTCTAGCTGGAACTCAGGGAGCATTAGGCACTCAGGGAACCATAGGTACTGGAACTCAAGGAACTGTTGGTTCACAAGGTCTTTCTGGAACTCAAGGCACATCAGGCACTCAAGGGTCTATTGGGTCGCAAGGAACCATAGGTTCTCAAGGAACAGTAGGTGCTGGAACTCAAGGAACTGTTGGTTCACAAGGTCTAGCTGGAACTCAAGGAACTGTTGGGGCACAGGGTCTAGCTGGAACTCAGGGAGCATTAGGCACTCAGGGAACCATAGGTACTGGAACTCAAGGAACTGTTGGGGCACAGGGTCTAGCTGGAACTCAGGGAGCATTAGGTACTCAAGGAACTGTTGGGGCACAAGGAACCATAGGTACTGGAACTCAAGGAACGATTGGTTCACAAGGAACTATTGGTACTGGAACTCAAGGAACTATTGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACTATTGGGTCACAAGGAACCATAGGTACTGGAACTCAGGGAACTATTGGGTCGCAAGGTCTAGCTGGAACTCAGGGAACTATTGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACTATTGGGTCACAAGGAACCATAGGTACTGGAACTCAGGGAACTATTGGGTCACAAGGAACCATAGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACTATTGGGTCACAAGGAACTGTTGGGTCACAAGGATTAGCTGGAACTCAAGGAACGATAGGGGCACAGGGTCTAGCTGGAACTCAAGGAACGATAGGGGCACAGGGTCTAGCTGGAACTCAAGGAATAGTTGGGTCACAGGGAACTATTGGGTCACAAGGAACTGTTGGTTCACAAGGTCTAGCTGGAACCCAAGGGTCTATTGGGTCACAAGGTCTAGCTGGAACTCAAGGGTCTATTGGATCACAAGGAACCATAGGTACTGGAACTCAGGGAACTATTGGGTCACAAGGAACTGTTGGTACTGGAACTCAGGGAACTATTGGGTCACAAGGAACTGTTGGTACTGGAACTCAGGGAACTATTGGGTCACAAGGAACCATAGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACTATTGGGTCACAAGGAACCATAGGTACTGGAACTCAGGGAACTATTGGGTCACAAGGTCTAGCTGGAACTCAAGGAGCTTTAGGTACTCAAGGAACTACTGGTGCTGGAACTCAAGGAACCATAGGATCACAAGGACCAGTATATAATATTGCTTCTGTAAGCACTGCAAATACTGCAGATGGTGCAGGAAATACATATACCCTATTAGGTAATACTACGACAGTAGGATCTATTGTTACTGTAGATGGCGTTGTCCTTGTTCCAAATACAGACTATACAATTACTGGAAATATTAATCTCAAGTTACTTTTTGTTCCTACGATAAATTCTATTGTTGAAACTAGAAGTTTAAATGGTCAAATTGGTTCTCAGGGTCTTTCTGGAACTCAAGGTTCGCTGGGAACTCAGGGAACTGTAGGCGCAGGATCGCAGGGAACTATTGGCTCACAAGGTCTTTCTGGAACTCAAGGTTCGCTGGGAACTCAGGGAACTGTAGGCGCAGGATCGCAGGGAACTATTGGCTCACAAGGTCTTTCTGGAACTCAAGGAACTATTGGCTCACAAGGTCTTTCTGGAACTCAAGGAACGATTGGGTCACAAGGAACCATAGGGTCGCAAGGTCTAGCTGGAACTCAAGGAACTATTGGCTCACAAGGTCTTTCTGGAACTCAAGGAACGATTGGGTCACAAGGTCTTTCTGGAACTCAAGGAACGATTGGGTCACAAGGAACTATTGGCTCACAAGGTCTTTCTGGAACTCAAGGAACTATTGGATCGCAGGGAACTGTTGGTGCTGGAACCCAGGGGGCAGTTGGGTCGCAAGGCGCAATAGGTTCACAAGGAACTTTCGGCACTCAAGGAACTCTTGGAACACAAGGTATACTTGGATCTGGTTCACAAGGCGTTCAGGGTACGTCTGGTGCAGGTGGCGGTGGAACTCCTGGTGGCGCAAATACTCAAATTCAATTTAATAATGCAGGGGCATTCGGCGGTACAGCAAATCTAACATGGAACGTCGCATCAAGTCTACTAAGTATAGACGGTAATGTTCGCATTGCTAATAGTGGTAATTTGGTATTTGGTGGTAGTCAGGCAAATACAGTTGCCAACTCTCACTTCTCCATTACATATAACCCCGCAACATCGTCTCTTGACTTTACCTTCCTTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d84c2f809b31bf6db36afdf089d54d22b8070cdc2b4459c17f51ca38b338fa01
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4227
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50