Protein

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Genbank accession
YP_009838544.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MAGKKIDLGSVIGPAGPQGPAGATGPAGPAGPAGAKGDAGPAGPAGERGPVGPAGPAGERGLQGPAGPAGPAGAKGDKGDTPKLKFTVEGGHLYMEELTE
Physico‐chemical
properties
protein length:100 AA
molecular weight: 9215,18960 Da
isoelectric point:5,76907
aromaticity:0,02000
hydropathy:-0,43400

Domains

Domains [InterPro]
DC_0620
STR
2–95
DC_0620
IPR008160
STR
14–71
IPR008160
YP_009838544.1
1 100
Architecture
STR
STR 2-95 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage susfortuna
[NCBI] 		2316154 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009838544.1 [NCBI]
Genbank nucleotide accession
NC_048712.1 [NCBI]
CDS location
range 1495 -> 1797
strand +
CDS
ATGGCAGGAAAAAAGATTGATTTAGGGAGTGTAATAGGTCCAGCAGGTCCACAAGGTCCAGCAGGTGCAACAGGTCCAGCAGGTCCAGCAGGTCCAGCAGGTGCAAAAGGTGATGCCGGTCCAGCAGGTCCAGCAGGTGAAAGAGGTCCAGTAGGTCCAGCAGGTCCAGCGGGTGAAAGAGGTTTACAAGGTCCAGCAGGTCCAGCAGGTCCAGCAGGTGCAAAAGGTGACAAAGGGGATACACCGAAATTAAAATTTACTGTTGAGGGCGGTCACTTATACATGGAGGAATTGACTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
651038bb7e6a943f622675c656c5481974cd201cb7286207f5e2c1a0b8d4579c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8975
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Clostridium perfringens phage susfortuna Kot,W., Ploeger,M., Pedersen,J. and Hansen,L.H. 2020-12-01 — GenBank