Protein

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UniProt accession
A0A8S5V255 [UniProt]
Protein name
Collagen I alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAFEKITDSELESVGVELLDDVPGLSPGAMKAKFEETAKKLLAPKFNKLVETLDGMDLQLAIKGGDSVLYLRVNEDKVLETSVDGKTWESTGSSGHLILNENGVPVEQRSRMQFTGAEVTDSGGVTVIALRKGDVGPQGPQGIAGPQGETGPQGEVGPQGPQGIQGPKGPVGETGPQGAMGATGPRGPEGPQGEKGVDGTSFTVLGRYDTLDLLKAAHATGSPGDAYAVGSETTNVIYIWDVDSANWKGVGSLQGPQGPIGPQGPIGATGKTGPPGEIGPQGPQGEQGVQGPIGPRGEQGEQGIQGLQGVQGPIGPRGPQGEKGDPGVIQSVNGKTGTSIELNASDVGAYTKEETDTKLGSKMDTAVYDPQGRRTDIFKAIDGTAALYTATLTLDGWEACSGTDLTDGYLYKQTATLTPDNSAAPAVTADSTFVSGVQFTPTGVAATDETLADVLNIINDGRTVSGAGNVTVYVTEKPTAEIHARWAITT
Physico‐chemical
properties
protein length:490 AA
molecular weight: 50204,97150 Da
isoelectric point:4,49155
aromaticity:0,04694
hydropathy:-0,40265

Domains

Domains [InterPro]
DC_0575
ATT
1–135
DC_0575 IPR008160 IPR008160 DC_1739
IPR050149
Unmapped
132–339
IPR050149
IPR008160
STR
136–194
IPR008160
G3DSA:1.20.5.320
STR
172–218
G3DSA:1.20.5.320
DC_1065
STR
185–300
DC_1065
A0A8S5V255
1 490
Architecture
ATT
STR
RBD
ATT 1-135 | STR 136-306 | RBD 340-474 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctncN39
[NCBI] 		2825170 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG00834.1 [NCBI]
Genbank nucleotide accession
BK016183 [NCBI]
CDS location
range 2171 -> 3643
strand -
CDS
ATGGCATTTGAAAAAATCACGGACAGCGAGCTGGAAAGCGTGGGGGTTGAGCTGCTGGACGATGTGCCGGGGTTAAGCCCCGGTGCAATGAAAGCCAAATTTGAGGAAACCGCAAAAAAGCTGCTGGCGCCGAAGTTTAACAAGTTGGTGGAAACGCTGGACGGCATGGACCTGCAGCTTGCCATAAAGGGCGGCGACAGCGTTTTATACCTGCGTGTCAACGAAGATAAAGTGCTGGAAACCAGTGTTGATGGCAAAACCTGGGAGTCCACCGGCAGCAGCGGCCACCTGATCCTGAACGAGAACGGTGTACCGGTAGAGCAGCGCAGTCGAATGCAGTTTACCGGTGCGGAAGTGACCGACAGCGGCGGGGTCACGGTCATTGCACTGCGCAAAGGTGATGTAGGACCGCAAGGCCCGCAGGGCATTGCCGGACCGCAGGGCGAAACAGGTCCCCAGGGTGAAGTTGGTCCGCAGGGACCTCAGGGCATACAGGGCCCCAAAGGCCCCGTTGGAGAGACGGGACCGCAGGGAGCCATGGGTGCCACCGGGCCGCGGGGACCTGAGGGGCCTCAAGGCGAGAAAGGCGTGGACGGCACCAGCTTTACAGTGCTGGGACGGTACGACACGCTGGACCTTCTGAAAGCCGCCCATGCGACCGGCAGTCCCGGAGATGCCTATGCGGTCGGCAGTGAAACGACCAATGTCATATACATCTGGGACGTGGACAGCGCGAACTGGAAGGGCGTGGGAAGTCTGCAGGGGCCGCAAGGCCCGATTGGCCCGCAGGGACCGATCGGCGCGACCGGCAAAACCGGTCCCCCAGGCGAGATTGGCCCGCAGGGTCCCCAAGGCGAGCAGGGCGTACAAGGTCCCATCGGCCCCCGCGGAGAGCAGGGAGAACAGGGAATCCAGGGTCTTCAGGGCGTGCAGGGGCCGATTGGGCCGAGAGGCCCGCAGGGTGAAAAAGGTGACCCCGGCGTGATCCAGAGTGTGAACGGCAAGACCGGCACCAGCATTGAGCTGAACGCCAGCGACGTAGGCGCGTACACCAAAGAGGAAACCGACACGAAACTGGGTTCCAAGATGGATACCGCGGTGTATGACCCGCAGGGGCGGCGAACCGATATTTTTAAGGCCATTGACGGCACGGCGGCGCTGTATACTGCCACGCTGACGCTGGATGGCTGGGAAGCCTGCTCCGGAACAGATTTGACCGACGGCTACCTGTACAAGCAGACCGCCACGCTGACCCCGGATAACAGTGCCGCCCCGGCTGTAACGGCTGACAGCACCTTTGTAAGCGGGGTGCAGTTTACGCCCACCGGCGTGGCTGCTACCGATGAAACGCTGGCGGACGTGCTGAACATCATCAACGATGGCCGCACCGTGAGCGGGGCAGGAAATGTGACCGTATATGTGACCGAGAAGCCTACCGCTGAAATCCATGCGCGGTGGGCGATTACGACTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
b02891cfd3f98830271e0e63970d7bac5626e4e25a3767a6272e42a45fdb7a8b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6850
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50