Protein

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Genbank accession
YP_009055848.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSPYHTAFRNGMYTGQNEDLFRHLELDLLKAIKKVNGITPDENGNINIPVGGSSELAHLEDVSLVGMTDKDVLTYDSTLGKWVPAPNQGKASSYILELSKWGISNVGTKATETTTGINNALDWASNNGFTDVVFPKGTYLISKDSAVKPVDYLTIDLNGATLKKETNNLQTYSVVSFKHNQKYVTIKNGKIVGDKDLHDYSSGGTHEGGYGIELGSFSPPADGGNNLRFIVLENLEISDFTGDSITLNSSFGQILPTPTNLASSWELGTISNTDGTLAASTTKIRSTLKFDMTQPLITKYKYFGLYGNGYGGLGADIKCDYYDVIFYKSNDAFISSAKSVQFFDEVEVPTGASYARVVLHQSNVPVAANCTINVRVPTFAQFVYINKCDLHHNRRQGISVCGAKNLYIDGNQIHHISGVDPQSGIDIEDGYDLNQMIHINKNFFYSNEKYNIIVVNGKNIFVKDNVLLPPTNSGYVSLAINGGADKVVATGNIIRFSKVTLFGEVLFANNYMYGCQVTSTVAYATKQTKIEGCTFHNCKYVSDNPYPFSVTVDNCSFFNDVDKLNALSNSIQWTLEVKQEPQSFVNCIFQGKDVNYLTYVGSAASFKQGWIFQNCKFKNTKDTGLLCGTYVNCDFTELSTFMNISRNTDATNSLELVNCNFSSTDGNNALLTVTQLKSFIMKGCKVDKTSGYILTVQNVNDEVFITDNILKQTNDALPRAMVTVEATFTGSAIIMKDNYFRAKNNSQVAINDLTTNTPAFVIQNNVLNKATINSTSTLKSNNVVNGVVQ
Physico‐chemical
properties
protein length:790 AA
molecular weight: 86694,44880 Da
isoelectric point:5,85836
aromaticity:0,10127
hydropathy:-0,20747

Domains

Domains [InterPro]
DC_0540
ATT
1–106
DC_0540 IPR012334 IPR012334
IPR011050
STR
107–555
IPR011050 IPR006626
IPR006626
Unmapped
182–217
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1830
IPR039448
ENZ
384–467
IPR039448
YP_009055848.1
1 790
Architecture
ATT
STR
ATT 1-106 | STR 107-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009055848.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,9906
Central domain 111 779 670 0,9817
C-terminal 780 790 10 0,3956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-779
C-terminal
780-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Riley
[NCBI] 		1486662 Uroviricota > Caudoviricetes > Herelleviridae > Bequatrovirus > Bequatrovirus riley
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009055848.1 [NCBI]
Genbank nucleotide accession
NC_024788.1 [NCBI]
CDS location
range 41506 -> 43878
strand +
CDS
ATGTCTAGTCCGTATCATACTGCATTTAGAAATGGGATGTACACAGGACAAAATGAGGATTTATTTAGGCACCTAGAACTAGACTTGTTAAAAGCAATCAAAAAAGTAAACGGAATTACACCGGATGAAAACGGTAATATCAATATACCTGTCGGGGGTAGCTCTGAACTAGCACATTTAGAAGATGTTAGTTTGGTAGGTATGACCGATAAAGATGTTCTTACATACGACTCTACTTTAGGTAAATGGGTTCCAGCACCGAATCAAGGTAAAGCTTCCTCATATATACTAGAGTTGAGTAAGTGGGGTATAAGTAATGTAGGAACAAAAGCAACAGAGACAACTACAGGAATCAATAACGCATTAGATTGGGCTAGTAATAATGGTTTCACAGATGTAGTATTCCCTAAAGGAACCTACCTTATTAGCAAGGATAGTGCGGTAAAACCTGTAGATTATTTAACAATAGATTTAAACGGAGCTACACTAAAGAAGGAAACGAACAACCTTCAAACATACAGCGTAGTTAGTTTTAAGCATAACCAGAAATACGTAACAATTAAGAATGGTAAAATAGTAGGTGACAAAGACTTACACGACTATAGTAGTGGCGGAACGCATGAAGGTGGATACGGTATAGAGCTAGGTAGTTTTTCTCCTCCAGCAGATGGCGGCAATAACTTACGATTTATTGTATTAGAAAATTTAGAAATATCTGATTTTACAGGAGATTCTATCACACTGAATAGTTCCTTTGGTCAGATTCTACCTACACCTACAAACCTAGCATCATCATGGGAATTAGGAACGATAAGCAATACAGATGGTACCCTTGCTGCTAGTACAACTAAAATCCGTTCAACATTAAAGTTCGATATGACGCAGCCACTTATTACAAAATATAAATATTTCGGTTTATACGGAAATGGATATGGTGGATTAGGTGCTGATATTAAATGTGATTACTACGATGTAATTTTCTATAAATCGAACGACGCATTTATATCTTCTGCTAAGAGTGTGCAATTCTTCGATGAAGTAGAAGTACCAACTGGAGCAAGTTACGCAAGAGTCGTACTTCACCAATCTAACGTACCTGTAGCAGCTAACTGTACAATAAATGTTCGTGTCCCTACTTTTGCACAGTTCGTATACATAAACAAGTGCGACTTACACCATAATAGAAGACAAGGTATATCTGTTTGTGGAGCGAAAAACCTTTACATAGATGGAAACCAGATACATCATATTTCGGGTGTAGACCCACAATCCGGGATAGATATAGAGGATGGATACGACCTAAACCAGATGATACACATTAATAAAAACTTCTTCTACAGCAATGAGAAGTACAATATCATCGTAGTTAATGGTAAAAACATCTTCGTTAAGGACAATGTATTATTGCCTCCTACTAACAGTGGGTACGTAAGTTTAGCGATAAACGGTGGAGCAGATAAAGTAGTAGCTACTGGTAATATCATTAGATTTAGTAAGGTTACCCTGTTCGGTGAAGTTTTATTCGCTAACAACTACATGTACGGATGTCAGGTTACATCTACTGTAGCATATGCAACAAAACAAACGAAGATAGAAGGATGTACATTCCATAACTGTAAATACGTATCGGATAACCCATACCCATTCTCTGTTACGGTAGATAACTGCTCATTCTTCAATGACGTGGACAAACTAAACGCGTTATCAAATAGTATCCAATGGACGTTAGAGGTAAAACAAGAACCGCAATCCTTTGTTAACTGTATTTTTCAAGGTAAAGATGTAAACTACTTGACTTACGTAGGTAGCGCCGCTTCATTTAAACAAGGATGGATATTCCAGAACTGTAAGTTTAAGAATACAAAAGACACTGGGTTACTTTGCGGTACATACGTTAACTGTGACTTCACTGAACTAAGTACATTCATGAATATATCTAGAAACACGGATGCTACGAATTCTCTAGAATTAGTTAACTGTAACTTCTCTTCTACAGATGGTAACAACGCGCTATTAACTGTTACACAATTGAAATCATTCATCATGAAGGGTTGTAAAGTAGATAAGACTAGCGGATACATTCTCACAGTCCAGAACGTAAACGATGAAGTATTCATAACAGATAATATCCTTAAACAGACAAATGATGCATTACCGAGAGCGATGGTTACGGTTGAGGCGACTTTCACAGGTAGCGCAATCATCATGAAGGATAATTACTTCCGAGCAAAGAACAATTCTCAAGTTGCTATAAATGATTTAACAACAAATACACCAGCTTTTGTAATACAAAATAACGTTCTAAACAAAGCTACAATCAATAGTACCAGCACATTAAAATCTAACAATGTAGTTAACGGAGTAGTGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14282f16e0d19bcbc8f0051b55d374f8a740658b648730086da6ceb3600bcb41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7776
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization and comparison of seven Myoviridae bacteriophage infecting Bacillus thuringiensis Sauder,A.B., McKenzie,Q.R., Temple,L.M., Alexis,B.K., Al-Atrache,Z., Lewis,L.O., Loesser-Casey,K.E. and Mitchell,K.J. — — GenBank