Protein

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Genbank accession
XOG07387.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPHLKAYDRQGNILAVGYNVELHEEVGSVIIPNLAPHTHYPKGEFFVSWEAERYETDKVEVPGFTTHESSFKEITFYFKDHILVKTKTAYDIAVDNGFEGTEQEWVESIKGEKGEKGETGVAGKDGESFSFEDLSEEQLNVLKGEKGEDGKDGKSSYELAVEEGFQGELDEYLASLHGEKGEPLKFSDLTEEQIQSLKGQDGTMTFEDLTEEQRASLKGDKGDIGEKGDPGESAYDLAVNEGFEGSITEFLSSLKGEKGDTGIQGIQGIQGEKGEPGIQGEPGKDFKYEDFTEDQLNSLKGEQGEQGIQGVPGQDGADGAKGEKGDPGIQGIQGEKGEQGEQGIQGVPGKDGTDAYIVVSSTEPAEGNIWFEVKD
Physico‐chemical
properties
protein length:375 AA
molecular weight: 40656,60800 Da
isoelectric point:4,35253
aromaticity:0,08267
hydropathy:-0,82640

Domains

Domains [InterPro]
DC_0876
STR
6–135
DC_0876 DC_1967 IPR008160
IPR050149
Unmapped
99–352
IPR050149
DC_2121
ATT
132–204
DC_2121 G3DSA:1.20.5.320 G3DSA:1.20.5.320
DC_0791
STR
284–371
DC_0791
XOG07387.1
1 375
Architecture
STR
ATT
STR
STR 6-131 | ATT 132-293 | STR 294-371 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage OPT-SC01
[NCBI] 		3239051 Viruses > unclassified bacterial viruses >
Host Staphylococcus xylosus
[NCBI] 		1288 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOG07387.1 [NCBI]
Genbank nucleotide accession
PQ046924 [NCBI]
CDS location
range 9803 -> 10930
strand -
CDS
ATGCCACATTTAAAAGCATATGATAGACAAGGAAATATACTAGCTGTAGGCTATAATGTAGAATTACACGAAGAGGTAGGTTCAGTTATTATACCTAACTTAGCACCTCATACACATTACCCTAAGGGTGAATTTTTTGTTTCTTGGGAAGCAGAGAGATACGAGACGGATAAAGTAGAGGTACCCGGTTTTACAACTCATGAGTCCTCTTTTAAAGAAATAACATTTTATTTTAAAGACCATATATTAGTTAAAACAAAAACAGCTTATGATATAGCTGTAGATAATGGATTTGAAGGAACAGAACAAGAATGGGTTGAATCTATAAAAGGAGAAAAAGGAGAAAAAGGGGAAACAGGTGTAGCCGGTAAAGATGGTGAATCTTTTAGTTTTGAGGATTTAAGTGAAGAGCAACTTAACGTGTTAAAGGGAGAAAAAGGGGAAGATGGTAAAGACGGTAAAAGTAGTTATGAATTAGCTGTCGAAGAAGGTTTCCAAGGAGAGCTAGATGAGTATTTAGCTAGCTTACATGGAGAAAAAGGAGAACCCTTAAAATTCTCAGATTTAACAGAAGAACAAATACAATCATTAAAAGGTCAAGATGGTACAATGACTTTCGAAGACTTAACTGAAGAGCAAAGAGCATCTCTTAAGGGTGATAAAGGAGACATAGGAGAAAAAGGTGACCCAGGAGAAAGTGCCTATGACTTGGCAGTTAACGAGGGATTTGAAGGTTCCATAACAGAATTCTTATCATCTCTTAAAGGAGAAAAAGGTGACACAGGAATCCAAGGTATCCAAGGTATCCAAGGTGAGAAAGGTGAACCAGGTATTCAAGGTGAACCCGGAAAAGACTTCAAGTATGAAGATTTTACAGAAGACCAACTAAACTCATTAAAAGGTGAACAGGGTGAGCAAGGAATACAAGGTGTCCCAGGACAAGACGGTGCTGACGGGGCTAAAGGAGAAAAAGGTGACCCAGGAATTCAAGGTATCCAAGGTGAGAAAGGTGAACAAGGTGAACAAGGAATTCAGGGTGTACCCGGTAAGGATGGTACAGATGCATACATTGTTGTATCTAGTACAGAACCTGCAGAAGGTAATATATGGTTTGAGGTGAAAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4146a22a037323680420d12777bd4754d6c0251eedec894a902b8a15ade4b2d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6868
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and therapeutic potential of newly isolated bacteriophages against Staphylococcus species in bovine mastitis Kim,D., Kim,Y., Cho,J.-H., Ko,S. and Lee,G.M. — — GenBank