Protein

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Genbank accession
XCO69247.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSTENRVIDIVVDEKVPYGLIMQFMDVDDSVYPPSEIPVNLTGYSLRGTIKASLDEDAETLATFKTRIIDAAQGAAAISLSVGDVNNIGIKASKERDKYNPRQRFAGYYDILMTRDVISSEVSSFRIMEGKVYVSDGVTQ
Physico‐chemical
properties
protein length:140 AA
molecular weight: 15465,31140 Da
isoelectric point:4,62609
aromaticity:0,07857
hydropathy:-0,16000

Domains

Domains [InterPro]
IPR055688
STR
4–134
IPR055688
XCO69247.1
1 140
Architecture
STR
STR 4-134 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_TUMS_E3
[NCBI] 		3229529 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO69247.1 [NCBI]
Genbank nucleotide accession
PP941779.1 [NCBI]
CDS location
range 33488 -> 33910
strand +
CDS
ATGAGTACAGAAAATAGAGTAATTGATATTGTTGTTGATGAGAAAGTGCCTTATGGTCTTATCATGCAGTTTATGGATGTTGATGATAGTGTATACCCTCCTTCTGAAATACCTGTTAATCTAACAGGTTATTCACTTCGTGGAACGATTAAAGCAAGTCTTGACGAGGATGCGGAAACTTTAGCTACTTTTAAAACTCGTATAATCGATGCGGCTCAAGGAGCTGCTGCTATTAGCCTTAGTGTTGGAGATGTTAATAATATCGGTATTAAGGCATCCAAAGAGCGTGATAAATATAATCCAAGACAACGTTTTGCAGGTTATTACGATATTCTAATGACTCGCGATGTTATTAGTTCAGAAGTCAGTTCTTTCCGTATTATGGAAGGAAAGGTTTATGTGAGTGACGGGGTAACTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ac972cb3fe76ca2d0b4efbbc2e1f180c045c8a0e1367e626a7722c8f24260dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization, and genome analysis of a new Salmonella phage vB_Sen_TUMS_E3 Torkashvand,N., Kamyab,H., Shahverdi,A.R. and Sepehrizadeh,Z. 2023-04-25 — GenBank