Protein

View in Explore
Genbank accession
UHS65532.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVIYFTAGIDLSGFKVIYDESTQRAYSLPSGIVSGTTAISLNEQAILVHSAGSVDLGELAVSREEYVTLSGSFDTGVTVNTKNELVVFTDGKYRWDGALPKVVPAGTDPTLPGSGYIRCSNQFTSTQTREALRRSYATAGYNLVDGSFESGGTLVNANDVLLQERTGKAFSGPAGIVVAGTNPITGGYKVAGIYKHFSSFYEMIASTEAELPVDSVCSTGGTMWVRSASQPALTSFTPISAICGDDFGITAGGSVSGQTISEFLTVAYTSGCRGYFRSVGEVTVTSNIELLSIDKNLVVDWSGIKLFGASDGVEMHLSSTEIQSSLLADMVSGSTVARVAGAVEGDLIYIEDNKTYETQWNFNSRELFIAERESGSNMKVDRPALFDHLVANNVKVNRYKPVRLIFNNFKMEHFNNRDNSSFVNIGTASFGVSSSWFRGFYMPVFSGDVETSGGSSYLLIACYMPRIGNVVANRCQYPISPAAGTYDTVVDSITASFCRHAASPTTWFNKFEVKKCFGYNNFATMDSHAGFDAKWRNVFATEEYDMPNIRCLGGELTDINIVASLGTTPAEDPQIGIVTFTGDSSMHRDWIAANVALNYKNRADDIFALPWQAGNVYYENINCMGGSIRCANTESKIKTVTLTNINAHVRLIGNCGNLKTLINNRVIPDGSFYMYENAPNANRTTLWEVNCGSISGASANKVLKIFDNYGTLESQNLLVKVKSCSSYNNGGSVAYIEKTYLVNHKIGATSAASLSGPVNEIRINGVTDSDISLNVTLTNSAGYTQSPDINAHFFELTIATTTSRPNNVFGITVEISKLN
Physico‐chemical
properties
protein length:849 AA
molecular weight: 91853,76990 Da
isoelectric point:5,31987
aromaticity:0,09894
hydropathy:-0,10448

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_1953
STR
1–150
DC_1953 DC_0018
IPR040775
RBD
90–140
IPR040775
UHS65532.1
1 849
Architecture
ATT
ATT 1-372 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UHS65532.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 285 285 0,9928
Central domain 286 706 422 0,9843
C-terminal 707 849 142 0,9483
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-285
Central
286-706
C-terminal
707-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-RPN242
[NCBI] 		2900331 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UHS65532.1 [NCBI]
Genbank nucleotide accession
OL656110.1 [NCBI]
CDS location
range 123067 -> 125616
strand -
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCCATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCATTTATTTCACTGCTGGTATTGATCTCAGTGGATTTAAAGTAATTTATGATGAGTCTACCCAACGGGCTTATTCTCTTCCTTCAGGTATTGTTTCAGGAACGACTGCGATAAGTCTGAACGAACAGGCAATCCTGGTACATTCAGCAGGTTCTGTAGATCTCGGGGAATTGGCTGTATCTCGTGAAGAGTACGTCACATTGTCTGGGTCATTTGATACCGGTGTAACAGTTAATACCAAGAATGAATTAGTTGTCTTTACAGATGGGAAGTACCGTTGGGATGGGGCATTACCTAAAGTAGTTCCTGCTGGCACAGACCCTACTCTTCCAGGGAGTGGTTATATTAGGTGCTCCAATCAGTTCACAAGTACACAGACCCGTGAGGCGTTGCGCCGTAGCTATGCAACAGCAGGCTATAATCTAGTAGATGGTAGCTTTGAGTCGGGCGGTACACTAGTGAACGCCAACGATGTGCTACTACAAGAACGCACTGGTAAGGCGTTCTCCGGTCCTGCTGGTATAGTTGTCGCTGGGACTAATCCTATAACTGGTGGTTACAAAGTTGCTGGAATATACAAACATTTCTCCTCTTTTTACGAGATGATTGCGTCCACGGAGGCAGAGTTACCTGTAGATTCGGTATGCTCAACCGGCGGTACAATGTGGGTCAGGTCTGCTTCCCAGCCGGCATTAACATCATTTACCCCTATAAGCGCGATTTGCGGAGATGATTTCGGCATAACCGCTGGAGGGTCTGTATCAGGCCAGACTATATCTGAATTCCTGACTGTAGCTTACACATCCGGGTGCCGTGGATACTTCAGGTCAGTCGGTGAGGTTACTGTAACCAGTAATATAGAACTATTGTCGATTGATAAAAACTTAGTTGTTGATTGGTCTGGCATAAAGCTGTTCGGGGCCTCTGATGGGGTGGAAATGCACCTGTCATCAACCGAGATTCAGTCTTCACTTCTAGCTGATATGGTAAGCGGCTCCACAGTTGCGCGGGTGGCTGGGGCTGTAGAGGGTGATTTGATTTATATAGAGGACAACAAGACGTACGAGACTCAGTGGAATTTTAACTCAAGGGAGTTGTTTATTGCAGAGCGTGAATCTGGTTCTAATATGAAAGTTGATAGGCCAGCGCTATTCGATCATCTAGTAGCAAACAACGTTAAGGTTAACAGGTACAAACCGGTAAGGTTGATTTTCAATAACTTCAAGATGGAGCACTTTAACAACCGTGATAACTCATCTTTTGTTAATATAGGCACCGCATCATTTGGGGTTTCATCTTCATGGTTCCGTGGTTTTTATATGCCAGTCTTTTCTGGTGACGTGGAAACCAGTGGTGGTTCCTCGTACTTATTAATAGCTTGCTATATGCCAAGGATTGGCAATGTAGTTGCTAATAGGTGTCAGTATCCTATCAGCCCTGCGGCGGGCACTTACGATACAGTTGTTGATAGCATCACAGCATCATTCTGTAGACATGCTGCCTCCCCAACAACATGGTTCAACAAGTTCGAGGTTAAAAAGTGCTTCGGTTATAATAACTTCGCCACGATGGACTCGCACGCTGGTTTTGATGCTAAATGGCGTAACGTATTTGCCACCGAAGAATATGATATGCCAAATATAAGATGTCTTGGTGGTGAGCTGACAGATATCAATATAGTTGCCAGTTTGGGCACAACCCCAGCAGAAGACCCTCAAATAGGTATCGTCACATTTACTGGTGATTCTTCTATGCACCGAGACTGGATTGCTGCTAATGTTGCGCTCAATTATAAAAACCGGGCGGACGATATTTTCGCGTTACCGTGGCAAGCTGGTAATGTCTATTACGAAAATATTAACTGCATGGGTGGTTCTATTAGGTGCGCAAACACAGAATCAAAAATAAAAACAGTAACATTAACAAACATCAATGCCCACGTGAGACTAATAGGTAACTGCGGAAATCTGAAAACATTAATAAACAACAGGGTAATTCCAGATGGTAGTTTCTACATGTATGAGAACGCACCGAATGCGAATAGAACTACATTATGGGAAGTGAACTGTGGAAGCATTTCTGGTGCATCTGCTAACAAAGTTTTAAAGATTTTTGATAACTATGGAACATTAGAATCGCAAAACCTACTGGTAAAAGTTAAGTCGTGCTCTTCATATAATAATGGGGGATCCGTTGCTTATATTGAGAAGACGTACCTGGTAAATCATAAGATAGGTGCAACTTCCGCCGCGTCGCTATCAGGACCTGTGAATGAAATTCGCATAAACGGCGTAACAGATTCGGACATATCACTCAATGTAACATTAACTAATTCTGCGGGATACACACAGTCACCAGATATAAACGCGCATTTCTTTGAGCTAACTATAGCTACAACCACAAGTAGACCGAATAACGTATTCGGTATAACTGTAGAGATATCAAAACTCAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c58b655b0da42938ec862908c14490e8cc2f3ae3aca55057fda5926f93ffae65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7053
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel Escherichia phage, vB_EcoM-RPN242 Imklin,N., Sriprasong,P., Thanantong,N., Lekcharoensuk,P. and Nasanit,R. — — GenBank