Protein

View in Explore
Genbank accession
QXV72263.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPAARYWRVSGAAAYAGGDLELSELHLCSGSGDASFNNVVLLVQGAGADGSTAFTDKSLSAKTLVPAGDVQNSETEKRFGNPSVRFDGTGDYIIGPKSADFAFGTGDFTVEAHVFQEVRTADVILVSLRDAASGIFSGPVRISSAGKVGLSDGSSWRETTDSVPVGAWSHVAVSRAGGTLRIFIDGVVGYTTTDPLDFSGARLLYIGAYEAYSGNPAGGFFQGYLDQIRITKGVGRYNTNFNPPPSPFATSTTVSYIRADEAATMICTGNPLTGTVADLRDEDTSSFARFSPRNSGFTFVWDFGAGQTADIAMVHPGSTTSRDRFLSHCDLHYSTDGSTWTVLAKIGRFNWPGPYQMADLTTFSGIPVGAVGVGQSMVVASDPPDGPVRARRIDGPHRLRDIYFAGRGFIAGTVKEKNTPSNVPLRRRVRLYRDRDGLLISETWSDRATGEYRFDEIDETERYTTVAYDHLHNYRAVLADNLTPEIMS
Physico‐chemical
properties
protein length:488 AA
molecular weight: 52546,69780 Da
isoelectric point:5,44344
aromaticity:0,10451
hydropathy:-0,23463

Domains

Domains [InterPro]
DC_2085
STR
9–215
DC_2085 DC_1745
IPR013320
STR
52–232
IPR013320
G3DSA:2.60.120.200
STR
85–310
G3DSA:2.60.120.200
PF13385
LEC
87–231
PF13385
QXV72263.1
1 488
Architecture
STR
RBD
STR 9-310 | RBD 311-488
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acidovorax phage ACF1
[NCBI] 		2856860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acidovorax citrulli
[NCBI] 		80869 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV72263.1 [NCBI]
Genbank nucleotide accession
MZ547449.1 [NCBI]
CDS location
range 32675 -> 34141
strand -
CDS
ATGCCGGCAGCACGATATTGGCGTGTGTCGGGTGCGGCCGCTTACGCCGGCGGTGACTTGGAACTTAGCGAACTGCACCTGTGCTCTGGCAGCGGGGACGCTTCGTTCAACAACGTGGTTCTCTTGGTGCAGGGGGCGGGCGCAGACGGATCGACTGCGTTCACGGACAAAAGTCTGTCAGCGAAAACGCTCGTTCCAGCAGGCGACGTGCAAAACAGCGAAACCGAGAAACGATTCGGAAACCCCAGCGTCCGGTTCGACGGCACGGGTGACTACATCATCGGCCCCAAGAGTGCCGACTTTGCGTTCGGCACTGGGGACTTCACGGTCGAGGCACACGTATTCCAAGAGGTTCGCACCGCAGACGTGATCCTCGTATCGTTGCGCGACGCTGCCAGCGGCATCTTTTCAGGCCCGGTGCGCATCAGTTCGGCGGGCAAGGTGGGCCTGTCGGACGGGAGCTCGTGGCGTGAAACCACAGACAGCGTGCCGGTGGGCGCGTGGAGTCACGTGGCCGTGTCTCGTGCCGGAGGTACGCTTCGTATCTTCATCGACGGAGTGGTCGGCTACACCACAACCGACCCACTGGATTTCAGCGGTGCGCGGCTACTGTATATTGGTGCATACGAAGCTTATAGCGGAAATCCCGCGGGTGGTTTCTTCCAAGGCTATCTCGACCAGATACGCATCACCAAAGGCGTTGGTCGCTACAACACCAACTTCAACCCGCCACCTAGTCCGTTTGCGACATCGACGACAGTCTCGTATATCCGAGCTGATGAAGCGGCTACGATGATCTGTACCGGCAACCCCTTGACCGGCACAGTGGCCGACCTCCGAGACGAAGACACAAGCAGTTTCGCGCGCTTCTCCCCTCGCAATTCCGGGTTCACGTTCGTGTGGGACTTCGGCGCTGGCCAGACAGCGGATATCGCCATGGTGCACCCCGGTTCGACGACAAGCCGAGACCGTTTCCTGTCGCATTGCGACCTGCATTACTCGACGGATGGCTCCACGTGGACCGTTCTCGCTAAGATCGGACGTTTCAACTGGCCCGGTCCATACCAGATGGCCGACCTGACGACATTCTCCGGCATACCGGTTGGCGCGGTCGGCGTTGGGCAGTCGATGGTTGTTGCCTCCGACCCGCCGGACGGCCCCGTGCGTGCGCGCCGCATCGACGGCCCGCACCGCCTGCGCGACATCTACTTCGCAGGCCGCGGCTTCATCGCTGGCACGGTGAAGGAGAAGAACACACCGAGCAATGTGCCGCTGCGCCGCCGCGTGCGCCTGTACCGCGATCGGGACGGCCTGCTGATCTCCGAGACCTGGAGCGACCGAGCCACCGGCGAGTACCGCTTCGACGAGATCGACGAGACCGAGCGCTACACCACGGTGGCCTACGACCACCTGCACAACTACCGCGCCGTGCTCGCCGATAATCTGACCCCGGAGATCATGTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee93c2f38f03878ba67d29f1a41d5c110aecc53a70e8a8e7fafa8617a4e6eb1a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50