Protein

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Genbank accession
XPT09291.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDFTRVKTNNVSHRKSDGSVTTAEEELHRLELNSGNGETGLGDHEAAADPHPQYFKDGDDIGSGLVYDLALTDWISKTAIVKNTVADMKTDIDLKLGSAVTTLGYHYPGDGGGNTYLIVDANTEVDDKGSYIDLVKHQAMGLFPQSVSICQFGAMKDDGTEAIDSTSSINSAILYVSSTKKGSLYVNPGIYMASKIILHDEVYIKGSGFDTTTLKQLPGSNTDFIESYDLDNSSIQRWGIERLDVDGSYFATGSAWNDSSPTLGNTSGGGIKVRSLGAVIDINLNNTAGIGLFMAPPIGTIDRTGVSDYTNTISVNGVNFGKEGVVIWGPNDWFLKRVYIGRAGILPRPDAENSFATSDLYSGQPVDGLVIDDTNVEIGDEVHVYACWSGGGFQTRNSCRLTKGGRIISESNNFQARLSSQTYGSAFIDVRNLSLIHPNWSIDKPSYSFPDPRWDAVSCYASNLELDVIINRTITTSTRVHGTTGFYMDGGAKVDVIYSNSTVPSTYNDPDAGDYYSGRGIFLKGRGGLVSAKVSQVNGDAITVHSEGLNLNFSATNCKNGSVLSRSSVSNSKRGNNITGSAYGCNTLFTSDGTPTSEILSISGEDCDVVFFR
Physico‐chemical
properties
protein length:614 AA
molecular weight: 65872,98560 Da
isoelectric point:4,81474
aromaticity:0,08795
hydropathy:-0,28453

Domains

Domains [InterPro]
DC_1917
ATT
6–178
DC_1917 DC_2304
IPR012334
STR
134–292
IPR012334
IPR011050
STR
146–562
IPR011050
XPT09291.1
1 614
Architecture
ATT
STR
RBD
ATT 6-178 | STR 179-562 | RBD 563-612 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPT09291.1
1 614
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,9872
Central domain 163 603 442 0,9825
C-terminal 604 614 10 0,2731
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-603
C-terminal
604-614

Taxonomy

  Name Taxonomy ID Lineage
Phage Cobetia phage Carin-5
[NCBI] 		3403038 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPT09291.1 [NCBI]
Genbank nucleotide accession
PV155638.1 [NCBI]
CDS location
range 87689 -> 89533
strand +
CDS
ATGAGCGATTTTACAAGAGTAAAGACTAACAATGTTAGTCATAGAAAAAGTGATGGATCAGTCACTACTGCTGAAGAAGAACTTCATCGGTTAGAGTTAAATTCAGGTAACGGTGAGACTGGACTAGGTGATCATGAAGCTGCAGCTGATCCTCATCCTCAGTATTTCAAAGATGGTGATGATATAGGATCAGGATTAGTTTATGATCTAGCATTAACTGACTGGATCTCAAAAACAGCAATAGTAAAGAATACTGTTGCTGATATGAAGACTGATATTGACCTAAAATTAGGTAGTGCAGTAACAACTCTAGGTTATCATTATCCAGGGGATGGTGGTGGAAATACTTATTTAATTGTTGATGCTAATACTGAAGTCGATGATAAGGGAAGTTATATTGATTTAGTCAAACATCAAGCTATGGGATTATTTCCTCAGTCCGTTAGTATTTGTCAGTTTGGAGCGATGAAAGATGACGGAACAGAGGCTATTGACTCAACAAGTAGTATAAATTCAGCTATATTGTATGTATCTAGTACTAAAAAAGGTTCATTATATGTGAATCCTGGTATATACATGGCATCTAAAATTATTTTACACGATGAAGTTTATATAAAAGGTAGTGGATTTGATACTACAACCTTGAAACAATTACCAGGTTCAAATACTGACTTCATAGAAAGTTATGATTTGGATAATAGTTCTATTCAACGTTGGGGTATTGAACGGTTGGATGTTGATGGTAGTTATTTCGCTACAGGATCAGCCTGGAATGATTCATCACCTACTCTAGGGAATACTTCAGGAGGTGGCATAAAGGTTCGTTCTCTAGGAGCTGTTATTGATATCAATTTGAACAATACAGCAGGAATCGGATTATTTATGGCTCCTCCTATTGGAACTATAGATCGGACTGGAGTGAGTGATTATACTAATACAATCAGTGTGAACGGAGTGAACTTCGGAAAAGAAGGTGTAGTTATTTGGGGACCTAATGACTGGTTCCTAAAGAGAGTATATATCGGTCGAGCAGGGATTCTACCTCGACCTGATGCAGAAAACTCTTTTGCTACATCTGATCTTTACTCAGGTCAACCTGTAGACGGATTAGTCATAGATGATACTAATGTAGAGATAGGTGATGAAGTTCATGTATACGCTTGTTGGTCAGGTGGAGGGTTTCAGACTAGGAACTCTTGTAGATTGACTAAAGGAGGTCGTATAATCAGTGAAAGTAATAATTTCCAAGCACGTTTGTCTTCACAGACTTATGGTAGTGCTTTTATTGATGTTCGAAATCTCTCTTTAATTCATCCTAATTGGAGTATAGATAAACCTAGTTACTCATTCCCTGATCCTCGATGGGATGCAGTTAGCTGCTATGCATCTAATCTTGAATTAGATGTGATCATCAATAGAACTATCACTACTTCTACTCGTGTTCATGGGACTACTGGATTTTACATGGATGGTGGAGCTAAAGTTGACGTAATCTATTCTAATAGCACTGTTCCTAGTACTTATAATGATCCTGATGCAGGGGATTATTATTCAGGAAGAGGAATTTTCCTGAAAGGTCGAGGTGGATTAGTATCAGCTAAAGTATCTCAAGTGAATGGTGATGCTATTACTGTTCATTCAGAAGGATTAAATCTGAATTTTTCAGCTACTAATTGTAAGAATGGATCAGTTTTAAGTAGAAGTTCTGTATCTAATAGTAAAAGAGGTAATAACATAACAGGTTCTGCTTATGGATGTAATACTCTATTTACTAGTGACGGAACTCCTACATCAGAAATATTAAGCATCAGTGGGGAAGATTGTGATGTAGTTTTTTTCAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec24255e73aaf84d8277a0243b857ccf15509de107f5fea07fedf51f67588f2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7347
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50