Protein

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Genbank accession
WZP35965.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSQQVNGWSSESEGLQKRPPMVFLKTLGGSDALGPAPYIHLINRDESEQYYAVFTGTGIRVFDLAGNEKQVRYTTDGSTYINTNNPRNDLRMVTVADYTFIVNRNVRVTRDINSVNLAGFNPKQDALINVRGGQYGRTLQIIINGNTQATYQIPDGSQPEHVGNTDAQWLAEELARQCRVSAPGWTFDVGQGYIHIKAPEGQQIDSLVTKDGYADQLINPVTHYAQSFSKLPTNAPEGYMVKIVGDASKSADQYYVRYDTTRKVWSETLGWSVNDQLLFETMPHALVRTADGNFEFKRIEWSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSIELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVQNYIPNGVFDICGSSTENFCAVLSQGDPSKIFMYKFLYLNEELRQQSWSHWDFGSNVQVLACQSINSDMYVILRNEFNTFLTRVSFTKSTTDLQGEPYRAFMDMKIRYTIPNGTYNDDTFTTTLHLPTIYGADFANGKITVLEADGKITEFEKPEVGWKNDPELRLNGNLEGRVVYVGFNIDFVYEFSKFLIKQVDNDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSHTMRTGKLNLGTGQYRFPVVGNAKFNTVSILSDATTPLNIIGCGWEGNYLRRSSGV
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89442,81940 Da
isoelectric point:5,27576
aromaticity:0,11698
hydropathy:-0,39560

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
WZP35965.1
1 795
Architecture
TTP
TTP 1-794 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZP35965.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9924
Central domain 144 349 207 0,1601
C-terminal 350 795 445 0,1998
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sal_R1S
[NCBI] 		3138064 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZP35965.1 [NCBI]
Genbank nucleotide accession
PP586055 [NCBI]
CDS location
range 12990 -> 15377
strand -
CDS
ATGGCCCTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAGCAGCCAGACATCCTTCGGTATCCAGACCAAGGGTCACAGCAAGTTAACGGTTGGTCTTCGGAGTCCGAGGGCCTCCAAAAGCGGCCACCTATGGTTTTCCTTAAGACCCTGGGAGGGAGTGATGCCTTAGGACCCGCACCATACATCCATCTGATTAACCGGGATGAAAGCGAGCAGTATTACGCTGTGTTCACCGGAACAGGTATCCGTGTGTTTGACCTTGCTGGGAACGAAAAGCAGGTACGCTATACCACTGACGGTTCCACATATATCAATACGAACAACCCGCGGAATGACCTAAGGATGGTCACTGTGGCAGACTATACGTTCATCGTTAACAGGAACGTGCGTGTCACACGAGATATCAACTCAGTGAACCTCGCAGGGTTTAACCCGAAGCAGGACGCTTTGATAAACGTTCGTGGTGGTCAATATGGTCGCACCTTGCAGATCATTATTAATGGCAACACGCAAGCAACCTATCAGATTCCTGATGGTTCTCAGCCAGAACATGTGGGCAATACGGACGCTCAGTGGCTAGCGGAAGAGTTAGCCCGTCAGTGCCGAGTAAGTGCACCAGGATGGACTTTCGATGTAGGTCAAGGGTACATCCATATTAAGGCCCCTGAAGGTCAACAGATTGATTCCTTGGTGACTAAGGATGGGTACGCTGACCAGCTGATTAACCCTGTCACCCACTACGCTCAGTCATTCTCTAAGTTGCCTACTAACGCCCCTGAGGGGTACATGGTGAAGATCGTAGGGGACGCCTCTAAGTCTGCCGACCAGTATTACGTTCGGTATGACACTACGCGTAAAGTGTGGTCTGAGACATTGGGGTGGAGCGTTAATGACCAACTTCTGTTTGAGACAATGCCACATGCACTTGTGCGTACTGCCGATGGTAACTTTGAGTTCAAGCGGATTGAGTGGAGCCCTAAGACTTGTGGTGATGATGATACTAACCCATGGCCTTCCTTCATGGATTCCACAATCAACGATGTGTTCTTCTTCCGTAACCGTTTAGGTTTCCTTAGTGGGGAGAATATCATTCTGAGTAGAACCGCCAAGTACTTTAACTTCTACCCGGCGTCCATAGCAAACCTGAGCGACGACGACCCTATAGATGTGGCTGTGAGCACCAACCGGATAGCAATCCTGAAGTATGCCGTTCCGTTCTCAGAAGAGCTACTCATCTGGTCAGACGAAGCACAATTTGTCCTGACAGCGTCCGGTACTCTTACGTCACGCTCCATTGAGCTGAACCTGACGACTCAGTTTGATGTACAGGACCGAGCGAGACCTTTCGGTATTGGCCGCAACGTTTACTTTGCAAGCCCAAGGTCAAGCTTTACGTCTATCCATCGATACTACGCTGTGCAGGATGTAAGTTCCGTTAAGAATGCCGAGGACATTACAGCACACGTCCAGAACTATATCCCTAATGGGGTGTTCGATATTTGTGGTAGCAGCACTGAAAACTTTTGTGCAGTTCTCTCTCAGGGGGACCCGAGTAAAATATTCATGTACAAATTCCTGTACCTGAACGAAGAGTTGAGACAACAGTCCTGGTCCCATTGGGACTTTGGGTCAAACGTGCAGGTGTTAGCCTGTCAATCCATCAACTCGGATATGTATGTGATTCTCCGCAATGAGTTCAATACATTCCTCACGAGAGTGTCGTTCACGAAGAGCACCACTGACTTGCAAGGTGAACCGTACCGAGCCTTTATGGACATGAAGATTCGCTACACGATACCTAACGGAACGTATAATGATGACACCTTCACAACCACTCTTCACCTGCCTACTATCTACGGTGCAGACTTTGCAAATGGTAAGATTACCGTTCTGGAGGCTGATGGGAAGATTACCGAGTTTGAGAAACCCGAGGTCGGCTGGAAGAATGACCCAGAGCTTAGACTTAACGGTAACTTAGAGGGTCGCGTAGTGTACGTTGGGTTCAACATTGACTTCGTTTATGAGTTCTCTAAGTTTCTCATCAAGCAAGTTGATAACGACGGGTCCACATCTACGGAAGACATAGGCCGCTTGCAATTACGGAGGGCGTGGGTGAACTATGAGGATTCTGGAACGTTCGATATTTATGTTGAGAACCAATCGTCCAACTGGAAGTATACAATGGCAGGTGCTCGCTTGGGCTCTCACACCATGAGGACTGGGAAGCTGAACTTAGGGACCGGACAATATCGATTCCCTGTGGTCGGTAATGCTAAGTTCAATACGGTGTCCATCTTGTCCGATGCGACTACCCCTCTGAACATCATTGGGTGTGGCTGGGAAGGGAACTACTTACGGAGAAGTTCCGGTGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7336032f719f10ead507eadd5bb03c770c575efa618f3e9371a0608eb9d4b824
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of Lytic Bacteriophage against Salmonella Typhi Sultana,M., Hassan,M.H., Rahman,M.A., Hossain,A. and Afrin,S. 2024-06-25 — GenBank