Protein

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Genbank accession
XPK42167.1 [GenBank]
Protein name
tail needle knob
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MADSNLNEPVIIQATRLDTSVLPRNIFSQSYLLYVIAQGTDVGNVANKANEAGQGAYDAQVRNDEQDVILADHEQRISAAEATLVNHEERISQAESTLQEHETRIAQNESDIASLDTRVQSLESQVSDHETRIDALEYATTRKKSEVVYSGVSVTIPTAPTNLVSLLKTLTPSSGTLAPFFDTVNNKMVVFNENKTLFFKLSIVGTWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGAAFTATTIKIIAEQ
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30540,51600 Da
isoelectric point:4,69390
aromaticity:0,06028
hydropathy:-0,20319

Domains

Domains [InterPro]
G3DSA:1.20.5.340
STR
37–124
G3DSA:1.20.5.340 IPR038681
SSF57997
STR
40–140
SSF57997
SSF57997
STR
50–140
SSF57997
Coil
Unmapped
70–139
Coil
IPR032395
RBD
108–282
IPR032395
XPK42167.1
1 282
Architecture
STR
STR 37-282
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Louie
[NCBI] 		3391566 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42167.1 [NCBI]
Genbank nucleotide accession
PQ850616 [NCBI]
CDS location
range 9131 -> 9979
strand +
CDS
ATGGCTGATTCGAATCTAAATGAGCCGGTAATCATCCAGGCTACGCGGCTCGACACATCAGTCCTTCCACGCAATATCTTCTCGCAGTCATATCTGCTGTACGTTATCGCACAGGGTACTGATGTTGGTAACGTGGCGAACAAGGCCAACGAGGCCGGACAGGGCGCTTATGATGCACAGGTCAGGAACGATGAGCAGGATGTGATTCTCGCTGACCATGAGCAGCGAATTTCTGCTGCGGAAGCAACGCTTGTTAATCATGAGGAGCGAATCAGCCAGGCAGAATCAACTCTTCAGGAACATGAAACACGAATAGCTCAGAATGAAAGCGATATTGCGTCGCTTGATACCAGAGTTCAGTCGCTGGAATCGCAGGTTTCAGACCATGAAACGCGCATCGATGCTCTGGAGTATGCCACTACTCGCAAGAAGTCAGAGGTTGTTTACTCTGGCGTATCTGTAACCATCCCGACAGCGCCGACCAACCTTGTTAGCCTGCTGAAAACGCTCACGCCGTCATCCGGCACGTTGGCACCATTCTTCGACACCGTTAACAACAAGATGGTTGTGTTCAACGAGAACAAAACCTTGTTCTTCAAGCTGTCGATTGTCGGGACGTGGCCCAGTGGAACCGCCAACAGGTCAATGCAACTAACATTTTCAGGTTCTGTTCCTGACACACTGGTAAGCAGTCGCAACTCAGCGACAACAACCGATAACATCTTGTTAGCTACGTTCTTCAGCGTGGATAAAGACGGCTTTCTTGCCACAAATGGCAGTACGTTAACCATTCAGTCAAATGGTGCGGCGTTTACTGCCACAACCATCAAAATCATTGCGGAGCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6213d5c654a7f7809d68a352d3f671abcda070c37dfd063de25e1da1a2b3bae9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8191
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank