Protein

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Genbank accession
WLW41212.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MVSLKAVGKSGSSWVSVLNGTGNWTGWQEQFNSQSTVTIANGGTGATTVARARENLLVDQVDRSGDQTMFWAPDKDTYLFVYSAGDWGVYDRSASARKALPIISGGTGGGDVNTARNNLSLGTGQQVIFDSVYLPNYKGSDWSYGFGCKINGGSLSSWSSRPVALSVDGNTTDVAVGIAKVTIPGKGYACNVDGILWGDGSSELDIMTGGARFYFHSDGGARASNWINVSDIRTKSNLNKIEDSLNKVKSLCGYTYQKRTNIDDPESKDYSMEAGIIAQDLQKVLPEAVYQVSQDGYLGVSYGGVSALLVSAVNEMNDIVIKQQQEIDELKELVKQLLAK
Physico‐chemical
properties
protein length:340 AA
molecular weight: 36457,16010 Da
isoelectric point:4,98691
aromaticity:0,08824
hydropathy:-0,27235

Domains

Domains [InterPro]
DC_1202
STR
3–340
DC_1202
IPR030392
CHP
230–334
IPR030392
IPR030392
CHP
230–290
IPR030392 Coil
WLW41212.1
1 340
Architecture
STR
STR 3-340
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WLW41212.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,3835
Central domain 134 329 197 0,2411
C-terminal 330 340 10 0,9935
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-329
C-terminal
330-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KKP 3953
[NCBI] 		3041359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLW41212.1 [NCBI]
Genbank nucleotide accession
OR067837.1 [NCBI]
CDS location
range 61917 -> 62939
strand -
CDS
ATGGTATCTCTAAAAGCCGTAGGTAAATCAGGAAGTTCTTGGGTATCTGTACTGAATGGTACGGGCAACTGGACTGGATGGCAAGAGCAATTTAATAGCCAATCTACTGTTACTATTGCTAATGGTGGTACTGGTGCTACTACAGTAGCAAGAGCGAGGGAAAATCTTCTGGTTGATCAGGTAGACAGATCTGGTGATCAAACTATGTTTTGGGCTCCTGATAAGGATACTTATCTCTTCGTTTATAGTGCAGGTGATTGGGGTGTTTATGACAGGTCTGCCTCTGCTAGAAAAGCTTTACCTATTATTTCTGGAGGTACAGGAGGTGGGGATGTTAATACAGCTAGAAATAATTTATCCCTGGGAACTGGGCAACAGGTAATATTTGATTCAGTATATTTACCAAACTATAAAGGATCTGATTGGTCTTACGGTTTTGGTTGTAAGATTAATGGAGGTTCTTTATCTTCTTGGTCTTCCAGACCTGTAGCTCTTAGTGTTGATGGTAACACTACTGATGTAGCAGTAGGTATTGCCAAGGTTACTATTCCTGGTAAAGGATATGCTTGCAACGTTGATGGAATTCTGTGGGGTGATGGGAGCTCTGAGTTAGACATAATGACAGGTGGGGCTAGATTCTATTTCCATAGTGATGGTGGTGCTAGAGCGTCTAACTGGATTAACGTTTCCGATATCAGAACTAAGTCTAATCTTAATAAGATAGAAGATTCGTTAAACAAAGTTAAGTCATTATGTGGCTATACATATCAGAAACGAACTAACATAGATGATCCTGAAAGTAAAGACTATTCTATGGAAGCAGGTATCATAGCTCAAGATCTTCAAAAAGTACTACCAGAAGCGGTATACCAGGTAAGTCAAGATGGTTACCTTGGTGTAAGTTATGGTGGTGTTTCTGCCTTACTAGTTAGTGCTGTTAATGAGATGAATGATATCGTCATCAAGCAACAACAAGAAATTGATGAACTCAAGGAATTGGTAAAACAACTCCTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb676d12c1b5fe6a9067c47645c1330255c6daaa935f5c204cbd8fa8fdf56c82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7489
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of newly isolated bacteriophages Wojcicki,M., Swider,O. and Srednicka,P. 2013 — GenBank