Protein

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Genbank accession
QSM01425.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKWTRIRNPRWLDETNIHAMVTFEGIGEVPFTANPHDVEAHGRAIHAAILSGEHGPIAPVDSTREKALQDAIRAREKRAILRDTRWPIDRHDEQRRLGIETTDGPGLIAALVSWRQQIRDWNSGDRPRLPMALKTMFKNQEY
Physico‐chemical
properties
protein length:142 AA
molecular weight: 16363,36860 Da
isoelectric point:9,28804
aromaticity:0,06338
hydropathy:-0,72606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_V524
[NCBI] 		2813169 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM01425.1 [NCBI]
Genbank nucleotide accession
MW595221.1 [NCBI]
CDS location
range 33974 -> 34402
strand +
CDS
ATGAAATGGACGCGGATCAGAAACCCTCGTTGGCTGGATGAAACAAACATCCACGCCATGGTGACTTTCGAGGGGATCGGGGAAGTTCCTTTCACTGCCAATCCGCACGACGTGGAGGCCCACGGAAGGGCCATCCACGCTGCGATCCTGTCCGGGGAGCACGGACCTATCGCCCCGGTAGATTCGACGCGGGAGAAGGCCTTGCAGGACGCTATACGAGCAAGGGAAAAGCGGGCTATCCTTCGCGATACCCGCTGGCCCATAGATCGTCACGACGAGCAGAGGCGGCTGGGTATCGAAACCACTGACGGACCTGGGCTGATAGCAGCTCTTGTTTCCTGGAGGCAGCAGATTCGCGATTGGAATAGCGGGGATCGGCCGCGACTTCCCATGGCTCTGAAAACGATGTTTAAAAATCAGGAGTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c336532939bbf6b67582e78f6849759c2211b6f779f69a5ae509980ca7c09d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage control of Pseudomonas aeruginosa in water Kauppinen,A., Siponen,S., Pitkanen,T., Holmfeldt,K., Pursiainen,A., Torvinen,E. and Miettinen,I.T. 2021-05-17 — GenBank