Protein

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Genbank accession
QXV73428.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGISNIVFEKSDGTIRTMKGTRDADFMPTMQTGKLTESTRKESTDMIPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11497,36820 Da
isoelectric point:9,34522
aromaticity:0,05882
hydropathy:-0,22941

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
QXV73428.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_Nami
[NCBI] 		2859059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV73428.1 [NCBI]
Genbank nucleotide accession
MZ502380.1 [NCBI]
CDS location
range 128870 -> 129178
strand -
CDS
ATGAAACTGACAACTGAACAAAAAGTAGCAATTCGTGAAATTTTGAAAACTAAATTGTCCATGGGTATTTCAAACATAGTTTTTGAAAAGTCTGATGGTACTATTCGTACTATGAAAGGTACTCGTGATGCCGATTTTATGCCAACCATGCAAACCGGTAAATTGACTGAATCTACTCGGAAAGAATCTACTGATATGATTCCAGTATTTGATGTTGAGCTTGGTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCCGTTAATGGTATGAAAGTTGAGCATTTGCTTCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88feb683b7f56f70c4a41224c02e3fc869224027083448691ec72af48813a29f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8509
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of vB_EcoM_Nami and vB_EcoM_Shinka infecting an UroPathogenic Escherichia coli (UPEC) Aparicio-Maldonado,C., Nobrega,F.L. and Brouns,S.J.J. 2019 — GenBank