Protein

View in Explore
Genbank accession
DBA34693.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAAVLPVQRSRQFQITYEPEGSFGTPVLPTTHTITWADAVLGDNFLKKPVFSDIPIGFSQPITVTYGPKAPQFSMPFQSIGGSFWNFLLGPDFTGTADEDIDGAAVGYTCFKHRIPTTQPYRGSSCNVDIARVTGVANDEIYRVQGAVLNEATITIQKDQFWQIESTILAQDVNLVSAARSGNWAVSLEERINGWYTSLLLDESEEIGFDQLRLTVNQNLKHSNDLTGTKLSSDLKGDEGGVEVALNGTFEVHVTDYIQKAFDEEHFDSVEIRFDDGNDKKMKVLLTDCYFDAPSVTLKKGDTEIIQNMILKPTGEDHIIVNRSFPTASIIDEW
Physico‐chemical
properties
protein length:334 AA
molecular weight: 37058,04410 Da
isoelectric point:4,55914
aromaticity:0,09880
hydropathy:-0,23952

Domains

Domains [InterPro]
IPR044000
TAS
73–303
IPR044000
DBA34693.1
1 334
Architecture
TAS
TAS 73-303 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
DBA34693.1
1 334
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,7743
Central domain 85 283 200 0,0107
C-terminal 284 334 50 0,3714
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-334

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp. vir519
[NCBI] 		3068359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA34693.1 [NCBI]
Genbank nucleotide accession
BK063666 [NCBI]
CDS location
range 17316 -> 18320
strand +
CDS
ATGGCTGCTGTACTACCAGTACAAAGATCAAGACAGTTTCAGATTACCTACGAGCCGGAAGGTAGCTTCGGGACTCCAGTCCTGCCGACCACTCACACCATCACCTGGGCGGATGCTGTTCTGGGTGATAACTTCCTCAAAAAACCTGTTTTCAGTGATATCCCCATTGGATTCTCACAACCGATCACAGTAACGTATGGTCCCAAGGCTCCACAATTTTCTATGCCATTTCAGTCTATTGGAGGAAGTTTCTGGAATTTCCTCTTGGGACCAGATTTCACAGGAACAGCTGACGAAGATATTGACGGTGCTGCAGTAGGATATACCTGCTTCAAGCACAGGATCCCAACCACTCAGCCATACAGGGGCAGTTCGTGCAATGTGGACATTGCCCGGGTAACTGGAGTGGCCAATGACGAGATCTATAGGGTGCAGGGTGCAGTCCTCAATGAAGCAACAATCACAATTCAGAAGGATCAGTTCTGGCAGATTGAATCAACAATACTCGCACAGGATGTGAATCTTGTCTCTGCAGCAAGATCAGGAAATTGGGCTGTCAGTCTTGAAGAGAGAATCAATGGATGGTACACAAGTCTACTTCTTGATGAATCAGAAGAAATTGGATTCGATCAACTGAGACTCACAGTGAACCAGAATCTCAAGCACAGCAATGACCTGACAGGAACAAAGCTTTCAAGTGACTTGAAGGGTGATGAAGGCGGTGTTGAAGTCGCTCTAAATGGAACCTTTGAGGTGCATGTTACTGACTACATACAGAAAGCCTTTGACGAAGAACACTTTGACAGTGTTGAAATCCGGTTTGATGACGGTAATGACAAGAAGATGAAAGTGCTCCTAACAGATTGTTACTTCGATGCTCCATCTGTGACGCTGAAAAAAGGAGATACAGAAATCATCCAGAACATGATCTTGAAACCAACAGGAGAAGACCACATCATAGTGAACAGATCATTTCCAACAGCTTCTATCATTGATGAATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b2888002caa7e02fbeed2c7685ecd7913b8d0da3c96160a2f6edd03905a63e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A compendium of viruses from methanogenic archaea reveals their diversity and adaptations to the gut environment Medvedeva,S., Borrel,G., Krupovic,M. and Gribaldo,S. 2023 37749252 GenBank