Protein

View in Explore
Genbank accession
WBK39718.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASNLVVTPHPLTLDGQTHIPAQLLPGQSLYSFLASNAPDTLDGGWAVTIGGRQVPVEMWTKTFPKDGHLIEVRSTVDNKQAFQLIALLVLTYFTFGIGAAGGFVAAGYGAVAATAVYVAGSVIINKVLGPKPPKTPAAEESGGVYSLNGATNSSRPYQALGIPFGAIDIAPDLLSKPYSYFEGDDQYLALLLTPGINVARVDNVRNGDNPFANYPGSQLFTSGMSGMPQQAIPLFTDVDSQPGGALQDEDKDPAVVLRTTPPDTVRIQIDIEYTLFGKGKKGNALYNEGTVTAEYRTAGTGSWLNLETRYVTNKDMRVHRMTLKKDVPPGQYDVRVTRSVMSLTGENDVAQFNFTSLTSVQRDTAQYLGISRVGIIFKATGQLSGTPNEIKMRVTAKPVQTWTGTQWRIADTVDNGLSNPGAQMLAYIRGYYDEAGNLIGGMGLSDMFIDIPAFQAFILHCEANDYKYNYYLRDSRTHSEVLESIALVGFGQVTNSTGKISVAWAGANQPVTAVVGMGTIRQGQFGVDYTLSNTADGVELSYFDADIGDTSVVRVASPGVTTALNPARIQAEGITTAKHAAEMARYHLGQSLYQAKDITFGADIEHITYRRLSVLSLSHDLTQWGYSGRLMAAAKVSGVVTLFLDTEVPPPSAGNAYVGVRIPGELSYRVMQVRPFSAPSKSIQLVGAWPIDAAFPGEASDNPAWDTTYCYDFKASPGYTVRVVGITPDADLKGAQVSVVPESAEFWNYVKTGTYIPAPNGSGLNTRPTVSGLKIVEAQVVQGNTVFTELSATWEVSGPYARADVLMAEGSGDSLLQTSSTTRSATWRIPGAGVYTITVRPFNPDGLAGYAQSLVFATKGADAPPVNPDIFDVQQVSGGLRRYVWGFGSDIIQSADYAGVEIRYTSGSVQSPVWETMLPVAGDDGSGFHTAPFESPTPVSGTYTFSLRSVNTSGRLSDQTLTIVRTLGKNLGELLDQINNDVSKAIVDAFQRDEAEARARVDAINAVITQVQDEATARATAVQQVTTALNQSIADQTAALLNEQLDRQAAIQTANQLRQSGDESLAYQISQISAGTGMQFDGIKTWYFDSSNEGWTGSASSGFLDPGDVYATSPTGLGVNGNAYRYVKMRIKRVGTPVWSGQLGWKSAGGTWSSLALSAPTFDANGIATVDANDIPWADTTVDQIRVKLSDTVTSSNYYLFDWVAIGRPTPGASVALVEDVRQANATALAAEAQQRNTLAVQLRGNYTGNDLDGLTSGLVYQERTARVTETSAISTRVDGMQVSLDGKASASALQTLSTKVETIDDKVTSASESVFALEAQLDGHTAGETGWTAGDTSVHVGARTVYSVIAESDLALARRVDTVSSDLGQFKGSATQQLQTLSTAQDAQAQLYQQVSAALDEKASTTSVNLLTTRVTEAEGNITANADNIAQAQAAIAGKAEASAVTALQTTVTNIDGRTTANANSITSVQAAVDGKASASTVFELTATVNSQGSAITSINSQAFLAVNSNNYIGGFKIGNNGQVVDFTVLADNFRIVAPAGGARLEYSAGTLRVYDNNNVLRVELGKLS
Physico‐chemical
properties
protein length:1571 AA
molecular weight: 166889,09950 Da
isoelectric point:4,88676
aromaticity:0,08084
hydropathy:-0,12673

Domains

Domains [InterPro]
DC_0129
STR
1–1096
DC_0129 DC_0793
IPR055385
ATT
255–362
IPR055385 DC_0793
WBK39718.1
1 1571
Architecture
STR
ATT
STR
STR
STR 1-254 | ATT 255-362 | STR 363-1096 | STR 1123-1570 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage L522
[NCBI] 		3003698 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39718.1 [NCBI]
Genbank nucleotide accession
OP948730.1 [NCBI]
CDS location
range 38092 -> 42807
strand +
CDS
ATGGCATCAAACTTAGTAGTTACCCCGCATCCACTCACATTGGACGGGCAGACACACATCCCGGCACAGCTGTTGCCTGGCCAATCGTTGTATAGCTTCTTGGCATCAAACGCCCCCGACACTTTGGATGGTGGGTGGGCAGTTACAATTGGCGGTAGGCAAGTCCCTGTAGAGATGTGGACTAAGACATTCCCCAAGGATGGTCACCTAATTGAGGTTCGCAGCACCGTAGACAACAAGCAGGCATTTCAGTTGATTGCATTGCTTGTATTGACTTACTTTACCTTTGGTATCGGGGCAGCCGGTGGCTTCGTTGCCGCCGGATATGGCGCTGTGGCAGCAACGGCTGTATATGTTGCAGGATCTGTGATTATCAATAAGGTGTTGGGCCCTAAGCCACCAAAGACGCCGGCGGCGGAGGAGTCAGGAGGTGTTTACAGCCTTAATGGGGCAACAAATTCCAGCAGACCATATCAGGCACTAGGCATACCGTTTGGTGCTATCGACATCGCCCCAGATCTACTTTCAAAGCCGTACTCTTACTTTGAGGGCGATGACCAGTACTTGGCACTGTTGTTAACTCCTGGCATTAATGTGGCCCGGGTTGACAATGTTCGAAATGGAGACAACCCATTTGCAAACTACCCGGGCTCTCAGTTGTTTACATCCGGAATGTCTGGAATGCCACAGCAGGCGATCCCTCTGTTCACTGATGTGGATAGCCAGCCAGGTGGGGCCTTACAGGATGAGGACAAGGACCCAGCGGTTGTGTTAAGAACAACTCCGCCAGACACTGTCCGTATCCAGATTGACATTGAATACACATTGTTTGGTAAAGGAAAGAAAGGAAATGCACTCTACAATGAGGGAACAGTCACGGCAGAGTATCGTACAGCAGGTACCGGGTCATGGCTAAATCTGGAGACGAGGTATGTAACGAATAAAGACATGCGTGTGCATCGTATGACCCTGAAGAAAGATGTACCGCCGGGTCAGTACGATGTTAGGGTTACTCGCAGTGTTATGTCACTTACTGGCGAAAATGACGTTGCCCAGTTTAACTTCACTAGCCTCACATCCGTGCAGAGGGATACTGCACAGTACCTTGGCATTTCGAGGGTAGGTATCATCTTTAAGGCTACGGGCCAGCTTTCTGGCACGCCAAATGAGATAAAGATGCGGGTAACTGCCAAGCCGGTACAGACCTGGACTGGCACTCAGTGGAGGATTGCAGATACTGTAGACAATGGGCTGAGCAACCCAGGTGCACAGATGCTGGCTTACATTCGTGGTTACTATGATGAGGCTGGTAATCTAATTGGTGGTATGGGTCTGTCAGATATGTTCATTGACATACCTGCATTCCAGGCTTTTATTTTGCACTGTGAGGCAAATGACTATAAGTACAACTACTACCTGCGTGATAGCAGGACACATAGTGAGGTACTTGAGTCAATTGCCCTTGTCGGGTTTGGCCAGGTTACAAATTCCACAGGGAAGATATCTGTTGCATGGGCAGGTGCGAATCAGCCTGTTACTGCTGTTGTTGGCATGGGCACAATTCGCCAAGGGCAGTTTGGAGTTGATTACACATTGTCAAACACTGCCGATGGTGTCGAGCTCAGCTACTTTGATGCGGATATCGGAGACACCTCCGTTGTACGTGTTGCATCACCTGGTGTTACTACCGCCCTGAACCCAGCACGTATCCAGGCAGAGGGCATCACCACTGCAAAGCATGCGGCAGAAATGGCACGTTACCATCTCGGTCAGTCACTGTATCAGGCAAAGGACATAACGTTCGGCGCAGACATTGAGCACATCACCTACCGCAGGCTATCGGTGTTGTCACTGTCCCATGACCTAACACAGTGGGGGTACAGTGGTCGCTTGATGGCAGCTGCTAAGGTAAGTGGGGTTGTCACGCTGTTCCTCGACACGGAAGTTCCGCCCCCGTCAGCAGGCAATGCCTATGTGGGTGTTCGGATACCTGGCGAGCTAAGCTACCGTGTAATGCAGGTAAGGCCATTCTCGGCCCCATCTAAGTCAATCCAACTTGTTGGTGCTTGGCCTATTGATGCTGCATTCCCCGGGGAGGCAAGCGATAATCCTGCTTGGGATACCACATACTGCTACGACTTTAAGGCAAGCCCTGGCTACACTGTGCGTGTTGTTGGAATTACGCCGGATGCCGACCTCAAAGGGGCGCAGGTGTCTGTTGTGCCGGAATCTGCGGAATTTTGGAACTACGTAAAGACAGGCACATACATACCAGCACCTAATGGCTCGGGGCTTAATACTCGACCTACAGTAAGCGGCCTGAAGATTGTTGAGGCGCAGGTTGTACAGGGTAACACGGTATTTACTGAGCTTAGTGCGACGTGGGAAGTGTCCGGGCCGTATGCAAGGGCGGATGTGTTGATGGCCGAAGGGTCAGGCGATAGCTTGTTGCAGACGTCTTCAACCACTCGCTCAGCAACATGGAGGATTCCCGGTGCCGGCGTCTACACAATCACTGTCAGGCCATTTAATCCAGACGGTCTGGCAGGGTATGCACAGAGCCTTGTATTTGCTACTAAGGGTGCAGATGCCCCACCTGTCAATCCTGACATCTTTGATGTCCAGCAAGTGTCTGGTGGTCTGCGTAGGTATGTGTGGGGGTTTGGCTCAGATATCATCCAAAGTGCAGATTATGCAGGTGTTGAGATCCGGTATACGTCAGGATCTGTACAGTCTCCAGTATGGGAGACTATGCTTCCTGTGGCGGGTGATGATGGGAGTGGTTTCCACACTGCGCCATTTGAGTCACCCACGCCTGTATCTGGTACCTACACATTCTCTCTGCGGTCGGTAAATACATCTGGCCGTCTATCGGATCAAACTCTCACCATTGTGAGGACACTTGGTAAAAACCTGGGTGAGTTGCTAGATCAGATCAACAATGATGTATCTAAGGCAATCGTTGATGCTTTCCAGAGGGACGAGGCGGAGGCACGTGCACGGGTGGATGCCATCAATGCGGTTATCACACAGGTGCAGGATGAGGCTACAGCACGTGCTACAGCAGTGCAGCAGGTAACTACTGCTCTCAATCAATCGATTGCAGATCAGACAGCAGCACTGCTTAATGAGCAGCTTGACAGACAGGCAGCAATACAGACTGCAAATCAGTTGAGGCAATCTGGTGATGAGTCCTTGGCCTACCAGATCTCACAGATAAGTGCCGGTACAGGCATGCAGTTTGATGGGATAAAGACTTGGTACTTCGACTCGAGCAACGAAGGCTGGACCGGCAGTGCCTCTTCCGGATTCCTTGATCCTGGTGACGTGTATGCAACCTCGCCAACAGGTCTCGGTGTAAATGGTAATGCCTATAGGTATGTCAAGATGCGGATCAAGAGGGTCGGAACGCCTGTTTGGTCTGGCCAGCTTGGTTGGAAGAGTGCAGGCGGAACATGGTCCTCACTGGCATTGTCAGCTCCCACCTTTGATGCAAACGGGATTGCCACAGTAGATGCTAATGATATCCCGTGGGCTGACACAACAGTTGACCAGATTAGGGTCAAGCTGTCAGACACCGTTACCTCTAGCAACTACTACTTGTTTGACTGGGTAGCTATTGGTCGGCCAACACCTGGTGCATCTGTGGCGTTGGTTGAGGATGTCCGTCAGGCTAATGCAACTGCACTGGCAGCAGAGGCTCAGCAGCGCAACACTTTGGCTGTACAGCTGAGAGGCAACTACACTGGCAATGATCTTGATGGGTTGACCAGTGGCCTGGTCTACCAAGAGAGGACAGCCCGTGTTACAGAGACATCGGCAATTAGTACGCGTGTCGATGGAATGCAAGTATCTCTGGACGGAAAGGCATCTGCATCGGCCTTGCAGACACTGTCAACGAAGGTAGAGACAATTGATGACAAGGTTACAAGTGCGTCCGAGTCTGTATTCGCCCTTGAGGCACAGCTTGATGGGCACACAGCCGGCGAAACAGGTTGGACAGCCGGCGATACCAGTGTGCATGTTGGTGCAAGGACTGTATACAGTGTGATTGCTGAGTCGGACCTGGCACTGGCACGGCGAGTTGATACAGTGTCTTCGGACCTTGGTCAGTTCAAGGGGTCCGCGACGCAGCAGCTCCAAACTCTGTCAACGGCCCAGGATGCACAGGCGCAGCTATACCAGCAGGTGTCCGCAGCACTTGACGAAAAGGCGAGCACAACCTCTGTCAATCTGCTTACAACCAGGGTTACAGAGGCTGAGGGCAACATCACTGCAAACGCCGACAACATTGCACAGGCACAGGCAGCGATAGCAGGTAAGGCAGAGGCGTCAGCCGTAACTGCGTTGCAGACAACTGTCACCAACATCGATGGCAGGACTACGGCGAATGCCAACTCCATTACCTCTGTGCAAGCGGCAGTGGATGGCAAGGCATCTGCTAGCACAGTGTTTGAGCTCACCGCGACGGTAAACTCCCAAGGGTCTGCAATTACGTCAATCAACTCCCAGGCGTTTTTGGCCGTCAATTCCAATAACTATATTGGCGGGTTCAAGATTGGCAATAATGGCCAGGTGGTGGACTTCACAGTTCTGGCGGATAACTTCCGGATTGTTGCCCCCGCTGGTGGTGCAAGGCTGGAGTACAGTGCAGGTACACTGAGGGTCTATGACAACAACAATGTGCTGAGGGTAGAGCTAGGTAAACTGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5bc688533c73cbf1b700d8d5f0785ae0b9ce7572898502c1106dfdea62f341d9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50