Protein

View in Explore
Genbank accession
URQ09037.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPANTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGALPKIVDAGSTPTTTGGVGLGAWISVGVASLRTQLANGNGSLIGIHPQGTLNNVLTVRTPEQYNAVGDGIDDDTSKLKEMLSDINNVPETLPNAAAVNSYMEQVAVKINLTKLYRFTETLYIPPGVSIEMPAPNFFTRECKQGLFYDPVDKNTAAISLMVYRKQPDGSYKLNKDVDYYPTGLDIDNGDAITCARKIDISNLNLITAPGVKVGVKWIGGAGCTTKGLSIGENTGSDITTARLPRVGLLQSASWGSVHENLRILYKTQGAVFIDSNGGAAVNNAYISRLGNTNGELEQAVYKPEGFTEVGDVAITQFAGSEVKFNNPIIEQASFDFVHAGRDTDSYGLFMVDKPHIESSGGKKKHSFYLINTSSDVTLSGVGLSGQDPDLDSMYFLKNCPETARNVVRGQMPVGGVKLVRGTGNYPTLVLDCTNMGSQFQFGEVGDIFYIKDVVGVKADTLYIDPVNGNNYNWGFNGTKPIRELLNISKLCQLFKCKSVYLNPGEIAITSNTELPMVNFEGTGSLKANSGSSFLIKTGGTLSLIGLAGISTDGGHMFRVSTREKVNIHTNCPVDSGAAYVVLSEVQGNIEYRQLFYSVNCSKYVGATASQTVAGVMVKTATRPTGIDAAPVDGNVSLSYKIIES
Physico‐chemical
properties
protein length:1095 AA
molecular weight: 116988,82960 Da
isoelectric point:4,84373
aromaticity:0,08311
hydropathy:-0,12457

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 DC_0018 G3DSA:2.160.20.130
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
416–480
IPR040775
URQ09037.1
1 1095
Architecture
ATT
ATT
STR
RBD
ATT 4-188 | ATT 299-580 | STR 581-908 | RBD 909-1095
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ09037.1
1 1095
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,9948
Central domain 527 1023 498 0,9673
C-terminal 1024 1095 71 0,9368
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-1023
C-terminal
1024-1095

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BRM 13314
[NCBI] 		2654656 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ09037.1 [NCBI]
Genbank nucleotide accession
ON169963 [NCBI]
CDS location
range 80319 -> 83606
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTGCGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGTGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAACACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATGTTAAAAATGAATTACTCACCCACACGGATGGTAAGTATCGTTGGGATGGGGCATTACCTAAAATTGTAGATGCTGGCTCAACTCCTACAACAACTGGTGGGGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGTTGCCTCTTTGAGAACACAACTGGCAAACGGCAATGGCTCGTTGATTGGAATTCATCCGCAGGGAACGCTAAATAATGTATTAACCGTGCGCACACCTGAACAGTACAATGCGGTAGGCGACGGAATAGATGACGATACTTCAAAATTAAAAGAAATGCTTTCAGACATAAACAACGTTCCTGAAACACTTCCTAATGCTGCGGCTGTAAATTCGTACATGGAGCAAGTAGCAGTAAAAATTAACCTGACCAAGTTATACCGTTTCACAGAGACGCTATACATACCCCCAGGTGTTTCAATTGAAATGCCAGCACCAAACTTTTTTACTCGTGAGTGTAAGCAAGGATTGTTTTATGACCCAGTAGATAAGAATACAGCAGCAATCAGCTTAATGGTGTACCGTAAACAGCCTGATGGTTCATACAAACTCAATAAAGATGTAGATTATTATCCTACTGGGTTAGATATTGATAATGGGGACGCTATAACATGTGCCAGAAAAATTGATATTAGTAACCTTAACCTGATTACAGCACCAGGTGTAAAGGTTGGTGTTAAATGGATAGGTGGGGCAGGTTGCACTACAAAAGGGTTATCCATTGGGGAGAATACAGGGAGCGATATTACAACAGCAAGACTGCCAAGAGTAGGATTGTTGCAGTCAGCATCATGGGGTTCTGTTCATGAAAATCTACGTATCCTGTATAAAACTCAGGGCGCAGTGTTCATTGACTCTAATGGCGGTGCTGCTGTAAACAATGCTTACATTTCTCGCCTTGGTAATACTAATGGTGAGTTGGAACAAGCAGTGTATAAACCCGAAGGATTTACTGAGGTAGGCGATGTTGCTATCACACAGTTTGCAGGTTCCGAGGTTAAGTTTAACAACCCAATCATCGAACAAGCATCTTTCGACTTTGTTCACGCTGGTCGAGATACTGATTCCTATGGTTTATTTATGGTTGATAAACCCCATATTGAGTCATCTGGCGGGAAGAAAAAACATAGTTTCTATCTTATCAATACCAGTTCGGATGTTACGTTGTCAGGAGTGGGTCTTTCAGGACAAGACCCTGATCTAGATAGTATGTACTTCCTTAAAAACTGCCCAGAAACTGCCAGAAATGTTGTCAGGGGACAAATGCCAGTAGGTGGTGTAAAACTCGTTAGGGGTACTGGTAATTACCCTACATTGGTACTCGACTGTACAAACATGGGAAGCCAATTTCAATTTGGGGAAGTTGGTGACATTTTCTACATCAAAGATGTTGTTGGCGTAAAAGCAGACACTCTATACATAGATCCTGTAAATGGTAATAACTACAACTGGGGATTTAACGGAACCAAACCTATAAGAGAGCTACTTAATATTTCAAAGTTATGCCAGCTATTCAAGTGCAAAAGCGTTTATCTTAATCCAGGTGAGATAGCCATTACCTCTAACACAGAGTTGCCGATGGTTAATTTTGAAGGTACTGGTAGCTTGAAAGCAAATTCTGGTAGTAGCTTCCTTATCAAAACCGGTGGGACATTATCATTAATTGGGCTTGCTGGTATATCTACAGATGGCGGCCATATGTTTAGAGTCTCCACCAGGGAAAAAGTAAACATACATACTAACTGCCCAGTGGATTCTGGTGCGGCCTATGTTGTTCTAAGTGAGGTTCAAGGTAATATTGAATACAGGCAATTGTTTTATTCTGTAAATTGTTCTAAGTATGTAGGTGCAACTGCGAGTCAAACTGTCGCTGGTGTCATGGTTAAGACCGCAACAAGACCGACAGGAATCGATGCTGCTCCAGTTGATGGTAATGTTTCTCTATCCTATAAAATTATAGAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
646de0ac7d93713b3fadb64ddad4557963660416dd18c327e2896f7ca34b411c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, comparative genomic analysis and efficiency of wild-type bacteriophages on the reduction of Salmonella Heidelberg colonization in broiler chickens Vaz,C.S.L., da Fonseca,F.N., Voss-Rech,D., Mores,M.A.Z., Coldebella,A. and Cantao,M.E. 2024-05 — GenBank