Protein

View in Explore
Genbank accession
WNL51138.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNANKFQGDGSTLTDLSANNITTGTINDARLPATISSDITGNAATATTAAACSGNSATATAATTVSITGTSAATDYRVTLGDGTGTGKNLLSDGQLLYNPSTNVLTSGSFSGSGSGLTSLNASNISSGTISDARLPGTISSDITGNATTVTVSSTNITTDHRVALTDGTGTKSILSDGQLLYNPSTDTLTAGTFSGSMAYSNLTGTPTIPTNNNQLTNGAGYITSSGSITGSSGSCTGNAATATGVAITGTGADVNYRVTLGDGTGVGKNLLSDGGLLYNPSTNVLTAGSFSGSMAYSNLTGTPTIPTNNNQLTNGAGYITSSGSITGNAATATNISGYSGTYWTSNNDGAGSGLDADLLDGENLVDNASTANSVAGRNSAGDIYARLIRQTYANQSTISGGMVFRVNNSTDNYLRVCNSTSAIRTFLNVPTRTGGDASGTWGINITGNSATATAATTVSITGTGADVSYRVTLGDGTGTGKNLLSDGGLVYNPSTNVLTAGSFSGSMAYSNLTGTPTIPTNNNQLTNGAGYITSSGSITGNAATATTAASCTGNSATATAATTVSITGTGANVNYRVTLGDGTGTGKNLLSDGGLLYNPSTNVLTAGTFSGSMAYSNLTGTPTIPTNNNQLTNGAGYITSSGISAGCSTSSNLTVISTAGAVLIRGNPSSNLSRVYRFGKPNANTTEVFFSLNSITADRTFTWPDAGGTIATTTSSDRRLKKDIADVTTQEALNFVHNVEPVTFCWRNEEANGIEHCHHKSAGYIAQQVSSAGYYYMLDTTPMEEDDVEKGNYFTHNKEEVDEATGVSNPDNAYYTLNYEMATPFLHKALADALTKIDELQARLDAAGL
Physico‐chemical
properties
protein length:850 AA
molecular weight: 86088,45110 Da
isoelectric point:4,64962
aromaticity:0,06000
hydropathy:-0,21212

Domains

Domains [InterPro]
DC_1875
STR
35–158
DC_1875 DC_1875 DC_1985
DC_1875
STR
137–235
DC_1875 IPR036388
IPR030392
CHP
717–845
IPR030392
IPR030392
CHP
717–772
IPR030392
WNL51138.1
1 850
Architecture
STR
STR
RBD
STR 35-235 | STR 385-540 | RBD 598-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNL51138.1
1 850
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,4970
Central domain 37 331 296 0,8569
C-terminal 332 850 518 0,6186
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-331
C-terminal
332-850

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51138.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 172309 -> 174861
strand +
CDS
TTGAATGCTAATAAGTTTCAAGGTGACGGTTCAACACTGACCGACTTGAGTGCTAATAATATCACTACTGGTACTATCAACGACGCCAGGTTGCCTGCTACTATCTCCTCTGATATTACTGGTAACGCTGCAACTGCAACCACAGCAGCGGCTTGTAGTGGTAACTCTGCAACTGCAACTGCTGCAACCACGGTTTCTATCACTGGAACATCAGCGGCTACTGACTATAGGGTCACTCTAGGAGATGGCACTGGTACTGGCAAGAACCTCCTTAGTGATGGTCAGTTGCTGTACAACCCATCAACGAATGTTCTGACCTCTGGATCATTCTCTGGTAGTGGTAGTGGTCTCACTTCGCTTAACGCAAGTAACATCTCGTCTGGTACTATTAGTGATGCACGCTTACCTGGTACTATTAGTTCTGATATTACTGGTAATGCTACTACTGTAACCGTTAGCTCTACAAACATCACTACGGACCATAGGGTTGCACTTACCGATGGTACAGGAACCAAGTCTATTCTTAGTGACGGTCAGTTGCTGTACAACCCATCAACAGACACACTGACTGCTGGAACCTTCAGTGGTAGTATGGCATACTCCAACCTTACTGGAACGCCAACCATCCCAACCAACAACAACCAGTTGACTAATGGTGCTGGTTACATTACTTCTTCTGGTAGTATTACTGGTTCATCTGGATCTTGTACTGGTAACGCCGCAACTGCAACCGGAGTTGCTATCACCGGAACAGGTGCCGACGTAAACTATCGAGTTACTCTTGGTGACGGAACTGGTGTTGGTAAGAACCTCCTTAGTGATGGTGGTCTTCTTTATAACCCCTCCACTAACGTTCTTACCGCAGGTTCGTTCTCTGGTAGTATGGCGTATTCCAACCTTACTGGAACGCCAACCATCCCAACCAACAACAACCAGTTGACTAATGGTGCTGGTTACATTACTTCTTCTGGTAGTATTACTGGTAATGCTGCAACCGCAACTAATATCAGTGGTTACTCAGGAACTTATTGGACTTCAAATAACGATGGAGCAGGTTCTGGACTTGACGCTGACCTGCTTGATGGTGAAAACTTAGTTGACAATGCTTCTACTGCTAACAGTGTTGCGGGTAGAAACAGTGCTGGTGATATCTATGCGCGTCTTATCAGACAGACCTACGCCAACCAGTCCACAATCTCTGGTGGTATGGTATTCCGTGTCAACAACAGCACTGATAACTATCTCAGGGTCTGCAATAGCACTTCTGCCATTCGTACCTTCTTAAATGTTCCAACAAGAACTGGTGGTGATGCTAGTGGAACTTGGGGAATTAATATTACTGGTAACTCTGCAACTGCAACTGCTGCGACCACTGTTTCTATCACCGGAACAGGTGCCGACGTAAGCTATCGAGTTACTCTAGGAGATGGCACTGGTACTGGTAAGAACCTCTTAAGCGATGGTGGTCTTGTTTATAACCCCTCCACTAACGTTCTTACCGCAGGTTCGTTCTCTGGTAGTATGGCATACTCCAACCTCACTGGAACACCAACTATCCCAACTAATAACAACCAGTTGACCAATGGTGCTGGTTACATTACTTCTTCTGGTAGTATTACTGGTAACGCCGCAACTGCAACCACAGCAGCCTCTTGTACTGGTAACTCTGCAACTGCAACTGCTGCGACCACTGTTTCTATCACCGGAACAGGTGCCAACGTAAACTACAGGGTCACATTAGGTGATGGAACTGGTACTGGCAAGAACCTCCTTAGTGATGGTGGTCTTCTTTATAACCCCTCCACTAACGTTCTTACTGCTGGAACCTTCAGTGGTAGTATGGCATACTCCAACCTCACTGGAACACCAACTATCCCAACTAATAACAACCAGTTGACCAATGGTGCTGGTTACATTACTTCTTCTGGTATCTCTGCTGGTTGTAGTACTTCTTCTAATCTAACCGTTATTTCTACTGCTGGCGCTGTTCTGATTAGAGGTAACCCATCCAGTAATTTATCTAGAGTTTATCGTTTTGGTAAACCAAATGCCAACACCACCGAAGTTTTCTTCAGTCTTAATAGTATCACTGCTGATAGAACCTTTACCTGGCCAGACGCAGGTGGAACTATTGCTACGACTACATCTTCTGATAGAAGACTGAAGAAAGACATTGCGGACGTCACAACCCAAGAAGCTTTGAACTTTGTCCATAATGTGGAACCAGTAACATTCTGTTGGAGGAATGAAGAGGCAAATGGAATAGAACACTGCCATCACAAATCGGCAGGGTACATTGCCCAACAAGTCTCATCTGCTGGATACTACTACATGCTAGATACAACTCCAATGGAGGAGGATGATGTTGAGAAGGGAAACTACTTCACCCATAATAAAGAAGAAGTAGATGAGGCAACTGGTGTTAGTAACCCAGACAATGCTTATTACACCTTGAACTATGAGATGGCAACACCTTTCTTACATAAAGCACTTGCCGACGCACTCACTAAGATTGATGAGTTACAAGCAAGACTAGATGCAGCAGGTCTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d14c55a863cc1b5b9b6c58d117753ffdeb86b632f6e114d2090a146519f939c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank