Protein

View in Explore
Genbank accession
QIG72528.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MSSKVRDSIEALRGSNSSIKDALATKAVASTVQSSLDAKASLTGSETLTNKTLSSPKIILTQSTSSLPTEEGVMEWDTDDNSIAVGDGTGTKVFRPNAWELIGSYSFTNVANFPITNLVAFKTLRITGDLALTSGGLGFIQLSSDNGSTFTTSGNHSLAYYGYSTAVVNGTSSTAVGYQMTVTTLANDPSLITATLTNLNKASTIKYMITHFTGLVTSSLHAGVTLASKSATLTGSQNAIRFIASAGNITGNIVLEGIRG
Physico‐chemical
properties
protein length:260 AA
molecular weight: 26969,87250 Da
isoelectric point:6,83179
aromaticity:0,06154
hydropathy:0,05269

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_6
[NCBI] 		2509763 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72528.1 [NCBI]
Genbank nucleotide accession
MN988524.1 [NCBI]
CDS location
range 176840 -> 177622
strand -
CDS
ATGTCGAGCAAAGTTAGAGACTCAATTGAAGCATTACGAGGATCTAACTCCTCGATTAAAGACGCACTAGCTACAAAGGCAGTCGCATCAACTGTTCAGTCAAGTTTAGATGCCAAAGCATCCTTGACTGGATCTGAAACACTTACTAATAAAACTTTATCGAGTCCTAAGATTATTCTCACTCAAAGCACATCATCACTTCCAACCGAAGAAGGTGTGATGGAGTGGGATACCGACGATAACTCTATAGCAGTAGGTGATGGGACTGGTACGAAAGTATTTAGACCTAATGCCTGGGAACTTATTGGATCCTACTCATTTACTAACGTTGCAAACTTTCCTATTACTAATCTAGTAGCATTTAAAACTCTGAGAATTACTGGTGACTTGGCACTGACTTCAGGTGGTTTAGGATTTATTCAATTAAGTTCAGATAACGGATCGACATTCACAACGAGTGGAAATCACTCTTTGGCTTATTATGGATATAGTACAGCAGTTGTAAATGGTACCTCAAGTACTGCAGTTGGTTATCAAATGACAGTTACTACATTGGCTAATGATCCTTCTCTGATTACTGCAACGTTGACTAATCTTAATAAAGCATCAACTATCAAGTATATGATTACCCACTTTACAGGACTAGTTACAAGTAGCTTGCATGCAGGAGTTACACTAGCGTCTAAGTCAGCTACTTTAACAGGTAGTCAAAATGCTATTAGATTTATTGCATCTGCAGGTAACATCACTGGAAATATTGTTCTAGAAGGGATTAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39ae89564257ea4fdc392be953c7f97ed45961fa987c6d56f246bb1d5cc51d16
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank