Protein

View in Explore
Genbank accession
XLM52919.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MNKLIAKNQLTVTNLLERAETRRETFYKLTNSADVPTAPSGNRNLALGTSGEWSELAQYFRGSTNETRFLYVVKKAGMQIGDTIQLRAVLKYDNIVPVEGKTVQAWAQTEGNTTHWNNGRINSTQHVDIVGSGEMVLTSTTTVDENHMLNDSWNFMVRFDYVASGTAQIKELKVEVGDLPTPYNQAPEDLGWSATALVPTQQQRYLWKFEYVYYSDDSVEITQPVNLSIAGADADTTGITDAINQTNQTVTSLQNSVSQAQSDLATVSSNLTQARQDLESSIASVNTKAQAVETALAQVQSTANANSQKTATLENDLDGLSARFSSLKIGAVNLLKNSKVFKGSNITGSSTILSETYQGCAVRYFKNTNPNSSYQDVVQFNNIVNPKVNSTYTISFWAKGSGTISTFFHGPQNFLPVASGYTSQERTTISGDGNVKFNLSDDWERYWVVYKLKNTYPTSDTTVSKHLLFRHDNNNTEEETYLAGVKLEEGNVATDYSPNEADIEQKVADYKQTVDQNYASLQSTVQALDGTVTANKATADQTAAGFKTRIESLETYQSGESTRANQYFESAKTETARQLTAERTAIANDYVAKSTYTSDVTGLRNDLTATTTTANTTKTNLASYQASNDQAVASLQSSLQTTNGNVSSLQTQINAVPGQITSAVSAVEGKIPTSVGAVNLLKNTKTFTGSNITGVSTVLSETYQGCAVRYFKNTNPNSNLQDFAQYLMCVVPNSESEYVVSFWAKGSGTTRVFFYNGLPVDSFVTSQGISESRGDGRATFTLTDDWQRYWVKYKLRATAEQQTVAKNLLFRHDNNSTEDEIYLAGVQLENGNVVSGYSPSPEDYDAALTQAKSEIKQTTDTITASVSSVETKADNAQTTANSAVSKANAAQTAVNTLDSEAVKSASLNLDNNGFVTKVGKTIDGNKFATMIAQNANNVKIIADEMQVTADMIVDGAVTAEKLDVNNLSAVNSDLGEIKGGSLLLQEDKLAGSATDSWGTYDRPAYKQGLFLDNRAFASSGAIQRKNGGETRPTDMPLAVLQSGELRFLVVDYNDNLKNVVHYGLSDPDFGAIRFEIDSELKRRLTMTSSGYLNFQASNYTDWTSTGVSGCEYMIQGRLVVVNYDVTFNSAGTHTIGGIPQEFTKKTLMMTAKAWSVMPDRDRNIQLNADGGLHILNAEANVNYRGTLVFSY
Physico‐chemical
properties
protein length:1191 AA
molecular weight: 129867,76870 Da
isoelectric point:5,01777
aromaticity:0,08396
hydropathy:-0,42972

Domains

Domains [InterPro]
DC_1398
STR
2–282
DC_1398 G3DSA:2.60.120.260 DC_0855
DC_1746
STR
215–590
DC_1746 G3DSA:2.60.120.260
G3DSA:1.20.1480.30
STR
233–329
G3DSA:1.20.1480.30
Coil
Unmapped
243–263
Coil
XLM52919.1
1 1191
Architecture
STR
STR 2-1106 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage vB_SbS-pSY22
[NCBI] 		3384977 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus ruminicola
[NCBI] 		2686210 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM52919.1 [NCBI]
Genbank nucleotide accession
PQ673863.1 [NCBI]
CDS location
range 1307 -> 4882
strand +
CDS
ATGAACAAATTAATAGCAAAGAATCAACTGACAGTGACGAATCTGCTGGAGCGAGCGGAGACGAGAAGGGAGACATTCTACAAGCTAACGAATAGTGCTGACGTCCCAACTGCGCCGAGCGGAAACAGAAACCTAGCGCTTGGAACAAGCGGCGAATGGTCTGAACTCGCTCAATATTTTCGTGGAAGTACAAATGAAACAAGGTTTTTGTACGTTGTAAAAAAAGCTGGCATGCAAATTGGTGACACGATACAGTTGAGAGCAGTTTTAAAATACGACAATATTGTCCCTGTTGAGGGCAAGACAGTCCAAGCTTGGGCACAAACCGAAGGAAACACCACGCATTGGAACAACGGTCGAATTAATTCGACGCAGCACGTTGATATAGTAGGAAGCGGTGAGATGGTACTTACATCGACAACGACTGTAGACGAGAATCATATGTTAAATGATTCTTGGAATTTTATGGTTAGATTTGATTACGTTGCTAGCGGCACTGCTCAAATCAAAGAGCTAAAAGTCGAAGTCGGCGATCTACCCACACCTTACAACCAAGCTCCGGAAGACCTAGGCTGGTCGGCAACTGCGCTAGTTCCAACACAACAACAGCGTTATCTTTGGAAATTTGAATACGTCTACTATTCAGACGACTCGGTTGAAATCACACAGCCAGTTAATCTATCAATAGCTGGCGCTGACGCTGATACGACAGGTATTACTGACGCGATTAACCAAACAAATCAAACGGTTACTAGTTTGCAAAACAGTGTCTCACAAGCTCAAAGCGATTTAGCGACTGTGTCTAGCAACCTAACACAAGCACGTCAAGATTTGGAAAGTTCGATTGCGTCCGTCAATACTAAAGCACAAGCGGTTGAAACCGCCCTCGCGCAAGTACAGTCAACAGCTAATGCCAACAGCCAAAAAACGGCAACACTGGAAAACGATTTGGACGGGTTGAGTGCGAGATTTAGTAGTTTAAAAATTGGCGCAGTCAACTTGCTTAAGAATTCGAAAGTTTTCAAAGGCTCGAACATCACAGGTTCATCAACGATTTTGAGTGAAACCTATCAAGGTTGCGCAGTCCGTTATTTTAAAAACACAAATCCGAATTCAAGTTATCAAGATGTTGTTCAATTCAATAATATTGTCAATCCGAAAGTTAATAGCACTTATACAATTAGCTTTTGGGCTAAAGGAAGTGGAACTATTTCAACTTTCTTTCATGGTCCGCAAAACTTCTTGCCTGTAGCCAGTGGCTATACAAGTCAAGAGAGAACAACAATTTCGGGTGACGGTAATGTTAAATTTAATCTATCAGACGATTGGGAACGCTATTGGGTCGTTTACAAGCTCAAAAATACTTATCCGACAAGTGATACGACGGTGTCAAAACACTTGCTATTCCGTCACGACAACAACAACACTGAAGAAGAAACATACTTAGCAGGCGTTAAGCTTGAAGAGGGCAATGTCGCAACAGACTACAGTCCGAATGAAGCTGACATCGAGCAAAAAGTGGCTGATTACAAACAAACCGTAGACCAGAACTACGCAAGCTTGCAAAGTACTGTACAAGCCTTAGATGGCACGGTGACAGCTAACAAAGCCACTGCTGATCAGACAGCAGCAGGCTTCAAAACACGTATTGAATCGTTGGAAACATATCAATCTGGTGAATCGACACGAGCTAACCAATATTTCGAGAGTGCCAAGACCGAAACAGCGCGTCAACTTACTGCAGAACGCACAGCAATTGCTAACGATTACGTAGCTAAGTCCACGTACACTAGCGACGTGACTGGCTTGCGTAACGATTTAACAGCAACGACCACGACAGCAAACACGACTAAAACTAATCTTGCTAGCTATCAAGCGTCAAATGACCAAGCAGTGGCTAGCTTGCAATCTAGTTTACAAACTACGAACGGAAATGTGAGCAGTCTACAAACGCAAATCAATGCAGTGCCTGGCCAAATCACAAGTGCTGTTAGTGCTGTCGAAGGCAAGATTCCGACGTCTGTTGGCGCAGTGAACTTGTTAAAAAACACAAAAACATTTACTGGTTCAAACATCACTGGTGTGTCAACAGTCTTGAGCGAAACATATCAAGGCTGCGCTGTGAGGTATTTTAAGAACACAAATCCAAATTCGAATCTTCAAGATTTCGCGCAATACTTGATGTGTGTAGTCCCAAATTCAGAAAGCGAATACGTTGTAAGCTTTTGGGCGAAAGGCAGCGGAACGACCAGAGTGTTCTTTTACAATGGATTGCCCGTCGACAGTTTTGTTACAAGTCAAGGCATTTCAGAGAGCCGTGGTGATGGACGTGCAACTTTTACTTTGACGGACGATTGGCAACGGTATTGGGTTAAATACAAGCTACGGGCGACTGCCGAACAGCAAACCGTGGCAAAAAACCTGCTTTTTCGACATGATAATAACAGCACCGAAGACGAAATCTATCTGGCGGGTGTGCAGTTGGAAAATGGTAATGTTGTTAGCGGGTACAGCCCGAGCCCTGAAGATTACGATGCTGCTCTCACGCAAGCCAAGTCCGAAATCAAACAAACGACTGACACAATCACAGCGAGCGTCTCAAGCGTTGAAACCAAAGCAGATAATGCACAAACGACTGCAAACAGCGCCGTCTCAAAAGCTAACGCGGCACAAACAGCAGTCAATACATTAGACAGCGAAGCCGTCAAATCAGCTAGCTTGAATCTTGATAATAACGGATTCGTAACAAAAGTTGGTAAAACCATCGATGGCAACAAATTTGCGACCATGATCGCGCAAAATGCTAACAACGTCAAAATCATCGCTGATGAAATGCAAGTCACTGCTGACATGATTGTCGACGGTGCTGTAACGGCCGAGAAGCTAGACGTCAATAATTTGTCAGCTGTTAATTCTGATTTAGGTGAAATCAAAGGCGGCTCATTGCTCTTGCAAGAGGACAAGTTGGCAGGTAGCGCGACTGATAGTTGGGGAACTTACGACCGTCCAGCATACAAGCAAGGCCTTTTCCTTGATAACCGCGCTTTTGCTTCATCTGGTGCGATTCAGCGGAAGAACGGCGGCGAAACAAGGCCAACGGATATGCCCTTGGCAGTTCTACAATCTGGTGAACTTCGTTTCCTTGTTGTCGATTATAATGACAATCTTAAAAACGTAGTGCATTATGGATTATCTGACCCCGATTTTGGCGCAATTCGCTTTGAAATTGACAGCGAGTTAAAACGCCGTTTGACCATGACATCGTCAGGCTATTTGAACTTTCAAGCGTCTAACTACACGGATTGGACATCGACAGGTGTTAGCGGTTGCGAATACATGATTCAAGGTCGCTTGGTAGTCGTTAACTATGACGTAACGTTTAATAGTGCAGGCACGCACACGATTGGCGGCATACCGCAAGAATTTACGAAAAAAACCTTGATGATGACAGCGAAAGCATGGTCAGTTATGCCAGACCGCGATAGGAATATTCAACTTAACGCTGACGGCGGATTGCACATTTTGAACGCTGAAGCTAACGTCAATTATCGCGGCACTTTAGTATTTAGTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b10d19ae728040c7998c2975443fc6dc7acf5b0b54a7eef14a7f0b39805eaae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6136
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50