Protein

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Genbank accession
QXV73966.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTYVSVKQLGGVISVATLETGDVVSTPAEIDNTRAIVFNQLEDNNAVCTLAAPQTSATPKLIHLTNNGDFPVTVQGVTLQPGPTYGIWWNGSAYSQIAVEGVGIVSNTQDSPSVHIGGDGSIIDPLTADVKLSAVLNNGLEIRSDGLYFQNVQIAPDRFVVVDTAAGSDTYAGTLTAPFKTIGKAIQTVLNQGLILVVGGTYTEALQLPAGKRFLVEGIGGANDSNIVSINGIIRNDAGAAGIRFKNLTLNSPAGQGPAVEFVDAAGGMMFDNVSITSDLTNDQASVVHFSGGNSSWYVFNEGSIKGGLKVEGDNNAPVISLLHGNEKTALYVDDVDATVQVSYQSYLGDITHLNGNLFLKSIATIGNIASSANSPNLLGIHDSSLFDLDTGGWKTLTKTGTAPYTLDLKRAATNNSFSGTPLFGSNASDIHGNYSPVAYTATNDSVAGHLEGIDDALASVGGGLSAVTSTDSATVDFSGAGTGAQPLTAAVKVSSNAGNVLQAESDGLFVAAADVGLTAVSHSNTDTTDITGDGTPSDPLQVEVSVSATAHNLLIKETDGLFVIEPSPLFETVINIPYMWGAGEMIYSYKASREYTLAQGLTGWQRDVVWLDDPDSPDPENPDPLVYPYTITLKKKNSLNVVTTIGTIDWNTGVTFPTAIQFTIGDVLYLEVDNEARFKSFALTILAQRPYTN
Physico‐chemical
properties
protein length:694 AA
molecular weight: 72622,86910 Da
isoelectric point:4,33769
aromaticity:0,07493
hydropathy:0,02104

Domains

Domains [InterPro]
DC_0915
ATT
2–340
DC_0915 DC_0915
IPR011050
STR
152–374
IPR011050
IPR012334
STR
161–396
IPR012334
IPR011459
Unmapped
166–206
IPR011459
QXV73966.1
1 694
Architecture
ATT
ATT 2-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV73966.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,9584
Central domain 212 419 209 0,8827
C-terminal 420 694 274 0,5646
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-419
C-terminal
420-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N46
[NCBI] 		2836127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV73966.1 [NCBI]
Genbank nucleotide accession
MW980063.1 [NCBI]
CDS location
range 183575 -> 185659
strand +
CDS
ATGACTTACGTCTCTGTAAAACAGCTTGGCGGTGTGATCAGTGTCGCAACTCTCGAAACCGGAGACGTGGTTTCCACGCCCGCCGAGATCGACAACACCCGCGCAATTGTCTTTAACCAACTTGAAGACAACAATGCAGTCTGCACATTGGCCGCTCCGCAGACGAGTGCTACGCCGAAGCTCATCCATCTTACCAACAATGGCGACTTCCCGGTAACTGTGCAGGGCGTCACGCTCCAACCGGGACCGACGTACGGCATTTGGTGGAATGGCTCTGCGTATTCGCAGATTGCGGTCGAAGGCGTTGGTATTGTTTCCAACACTCAAGACAGTCCGTCCGTTCACATCGGCGGCGATGGTTCGATCATCGATCCTCTTACCGCCGATGTGAAGCTTTCGGCAGTGCTGAATAACGGTCTGGAAATCCGTTCCGATGGTTTGTATTTCCAGAACGTCCAGATCGCGCCTGATCGTTTCGTTGTGGTTGACACCGCTGCCGGTTCTGACACGTATGCCGGTACTCTTACCGCGCCGTTCAAGACCATCGGCAAGGCCATTCAAACGGTTCTCAACCAAGGCTTGATCTTGGTAGTAGGCGGCACGTACACCGAAGCGCTTCAACTTCCGGCTGGTAAGCGCTTCCTCGTGGAAGGCATTGGCGGCGCGAACGATAGCAACATCGTTTCGATCAACGGCATCATCCGCAACGATGCGGGCGCTGCTGGTATCCGCTTCAAGAACCTGACTCTCAATTCTCCTGCCGGTCAAGGTCCAGCGGTCGAGTTTGTCGATGCTGCCGGTGGCATGATGTTCGACAACGTATCGATCACTTCCGATCTTACCAACGATCAGGCAAGTGTTGTGCACTTTTCCGGCGGCAACTCGTCGTGGTATGTGTTCAACGAAGGCTCGATCAAGGGCGGGCTCAAGGTAGAAGGCGACAACAACGCGCCGGTAATCAGCCTGTTGCACGGCAACGAAAAGACGGCGCTGTACGTCGATGACGTTGACGCCACGGTGCAGGTTTCCTACCAGTCGTATCTCGGTGATATCACGCACTTGAACGGCAATCTCTTCCTCAAGAGCATTGCTACGATTGGTAATATCGCATCGAGCGCCAACTCGCCGAACCTGCTCGGCATTCACGACTCGTCGCTGTTCGATCTCGATACGGGCGGTTGGAAGACGCTGACGAAAACCGGCACGGCTCCCTACACGCTCGATCTGAAACGCGCAGCTACCAACAACTCGTTTAGCGGTACGCCGCTGTTCGGCTCGAATGCGTCCGATATCCACGGCAATTATTCGCCGGTTGCTTACACAGCTACCAACGATTCAGTCGCCGGTCATTTGGAAGGCATTGACGATGCTCTGGCGAGCGTTGGTGGCGGTCTATCGGCTGTTACCTCGACAGATAGCGCCACGGTTGACTTCTCCGGTGCCGGTACGGGCGCACAGCCTCTTACCGCCGCCGTCAAGGTGTCGTCCAATGCAGGCAACGTTCTGCAAGCGGAAAGTGATGGTCTGTTCGTTGCGGCTGCTGACGTAGGTCTTACCGCCGTCTCGCATTCAAACACCGACACGACTGACATTACCGGCGACGGTACGCCGTCTGATCCGCTGCAAGTTGAAGTGTCGGTTTCCGCGACGGCGCATAACCTTCTTATCAAAGAAACGGATGGTCTGTTCGTTATCGAACCGTCGCCGTTGTTTGAGACGGTCATCAACATCCCCTACATGTGGGGTGCTGGCGAAATGATCTACTCCTACAAGGCTTCGCGAGAATATACCCTTGCGCAAGGTTTGACCGGTTGGCAAAGAGACGTTGTTTGGTTGGATGATCCGGATTCTCCGGACCCTGAAAACCCCGATCCGCTGGTCTACCCGTACACCATCACCCTCAAGAAAAAGAACTCGCTCAACGTTGTTACTACCATCGGAACCATCGACTGGAACACTGGCGTTACCTTCCCTACCGCTATCCAGTTCACGATTGGCGACGTGCTGTATCTGGAAGTCGACAATGAAGCGCGGTTCAAGTCCTTCGCTCTTACCATTCTGGCGCAGCGACCGTACACCAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
63e7f8bea5dec60d254118ee0b64d57da9339d176d0f112474465f0e92f57c3b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6770
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank