Protein

Genbank accession
YP_009021675.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MLQVTFDITTETPELTFSNVGIPGPRGLQGIQGEPGKDFKYTDFTPEQLAALVGPQGKEGKEGKEGKQGIKGDTGNTGLTGPVGPKFLYTDFTDDDKNDLRQPLRDEFSQTLADSQAAASQAAASSATAQGASLVTTQDKQAVTQTLATINAVKADIDNIQQSIDQTSIHIDSQAQVVDTQHSDVVSAAGTVNTNLGLVIQYKDEAAVSRQSASQSAQDAQAAAQVAQSALVYEGLWDPSTGVYPTTNNRNGVWKVVGVGTVGGINYQTGQELIWYKDTSSWQLIPSSTLITAINGYRQGDIVLTAADVGALPSTTQLFSGAYGDLSGKPTSFTPSAHTQGWSTITGKPTTATRWPTYAEVTGKPTLFSGKYGDLTGIPTTFPSDWATLTNKPPFATRWPTPGEVGALTVAQADAKYYSPANKPAWADVAGNAYVSASSGDLKVGSNTNLKASRTDKGFLPAQDGTGSSSTSYLGRPDWWFKEAWVNTYRGGAINITDGATLGGTLISNPSSASTYSYQRMPTYATGSKTLLRKFRGGYGDMIWHETVQGGAYRLAIGNEDSTEFLRLEGSDGYIRGHQIYTKGNKPTAADVGALSVGGGVIHGTLELTDSGTSTARTRLTNANGVSYLQVAKADGSAGTLRFSKLNTSNDPLSSIEAFVEANNFKINGHEVYTRGNKPSPADIGALPAQGKAVDSDKLAGFEVNYYVVPSTVVVRNANGDVNTRTINTTLQTQSEIGEDTAGIAFRLKDGLLRFANKTGLINWLGRVNDSTRFLGKTLDEVKTETRAGLIPDTRTVNGKRLNANIVVTQGDVGLGNVANFGNTNSYAGTSTALYATQKAAYDAAAAPRLEAERKRKITHGTAAPSGGADGDIYLQYK
Physico‐chemical
properties
protein length:878 AA
molecular weight: 92792,39400 Da
isoelectric point:5,90440
aromaticity:0,07973
hydropathy:-0,40342

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CHOED
[NCBI] 		1458716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009021675.1 [NCBI]
Genbank nucleotide accession
NC_023863.2 [NCBI]
CDS location
range 6388 -> 9024
strand +
CDS
ATGTTACAAGTTACATTTGATATTACTACCGAGACTCCTGAATTGACCTTCTCTAATGTTGGTATTCCGGGTCCTCGGGGTCTTCAAGGTATCCAAGGGGAACCCGGTAAAGACTTTAAATACACAGACTTTACACCTGAACAACTAGCGGCGCTTGTAGGGCCTCAGGGTAAAGAAGGGAAGGAAGGTAAGGAAGGTAAACAAGGAATTAAAGGGGATACAGGTAACACTGGTCTTACTGGCCCTGTAGGTCCTAAATTCCTCTACACAGACTTCACTGATGATGATAAGAATGACTTACGTCAACCTTTACGTGATGAGTTCTCTCAGACTTTAGCGGATTCCCAAGCGGCTGCCAGCCAAGCGGCGGCATCTAGTGCTACAGCTCAAGGGGCCAGTTTAGTAACCACACAGGATAAACAGGCGGTCACTCAGACCTTAGCTACCATCAATGCAGTTAAAGCTGATATTGATAATATCCAACAATCAATTGACCAGACCTCTATTCATATTGATAGTCAGGCGCAGGTTGTGGACACTCAACATTCTGATGTTGTAAGTGCGGCAGGTACAGTAAATACTAACTTAGGATTAGTGATTCAGTATAAAGATGAAGCTGCTGTATCTCGTCAGTCTGCCAGTCAGTCAGCACAGGACGCCCAAGCGGCTGCCCAAGTGGCCCAATCGGCTCTCGTGTATGAAGGTTTATGGGACCCTTCAACAGGTGTATACCCTACAACTAACAACCGAAATGGTGTATGGAAAGTAGTGGGTGTAGGTACTGTAGGTGGTATAAACTACCAAACAGGTCAAGAGTTAATCTGGTATAAAGATACATCTTCATGGCAGCTTATCCCTTCATCTACCTTAATCACTGCTATTAACGGTTACCGTCAAGGTGACATTGTGCTAACAGCGGCTGATGTAGGTGCATTACCTTCAACTACCCAGTTGTTCTCAGGTGCCTATGGGGACCTATCGGGTAAACCTACGTCTTTCACCCCTTCAGCTCATACTCAAGGGTGGAGCACAATTACAGGTAAGCCTACCACGGCTACCCGTTGGCCTACCTATGCGGAAGTTACAGGTAAACCTACGTTATTCTCAGGGAAATATGGGGACCTTACAGGAATCCCTACAACCTTCCCTTCAGATTGGGCTACTTTGACTAACAAGCCACCTTTCGCTACCCGTTGGCCTACCCCGGGAGAAGTTGGGGCCCTAACGGTAGCTCAGGCTGACGCTAAGTACTATAGTCCTGCTAATAAACCAGCATGGGCAGATGTAGCTGGTAATGCTTATGTCAGTGCTTCTAGTGGTGATTTAAAAGTAGGCAGTAACACTAACCTTAAAGCCTCTAGAACTGACAAAGGATTCTTACCTGCACAGGATGGGACTGGTAGTTCATCTACAAGTTACCTAGGGAGACCTGATTGGTGGTTCAAAGAAGCTTGGGTTAATACCTATCGTGGTGGCGCTATTAATATTACAGATGGAGCTACTCTTGGGGGGACTCTGATTTCTAACCCGAGTTCAGCATCTACATACTCTTATCAACGTATGCCCACATATGCAACCGGAAGTAAAACACTCCTCCGTAAGTTCCGAGGTGGTTACGGCGATATGATTTGGCATGAAACTGTCCAAGGCGGCGCATATCGTTTAGCGATTGGTAATGAGGATTCAACTGAGTTTTTAAGACTGGAAGGGTCTGATGGTTATATTAGGGGACATCAGATTTATACAAAAGGTAACAAACCAACTGCTGCTGATGTAGGTGCATTATCTGTAGGAGGAGGGGTCATACATGGGACACTAGAACTTACTGATAGTGGCACCTCTACTGCACGTACACGTCTAACTAATGCTAATGGTGTCTCATATTTACAGGTCGCAAAGGCTGATGGGAGCGCGGGTACTCTCCGTTTCTCAAAGTTAAATACATCTAATGACCCATTAAGTAGCATAGAAGCCTTCGTGGAAGCTAATAACTTCAAAATTAATGGTCACGAAGTGTACACTAGAGGGAATAAGCCAAGCCCCGCTGATATTGGGGCATTACCTGCACAAGGTAAGGCAGTCGATTCAGATAAGTTAGCAGGTTTTGAGGTTAATTATTATGTAGTACCTAGCACTGTAGTTGTACGTAACGCTAATGGGGATGTAAACACACGGACTATTAATACAACCTTACAGACTCAATCGGAAATCGGTGAGGATACCGCAGGTATTGCCTTCCGATTAAAAGATGGCCTCCTTCGGTTTGCCAATAAGACCGGGTTGATTAACTGGTTAGGTCGTGTTAATGACTCCACTAGATTCCTAGGGAAAACCTTGGATGAAGTCAAGACAGAAACACGTGCTGGACTTATCCCTGATACTCGTACTGTGAACGGTAAGCGTCTCAACGCGAACATCGTGGTAACCCAAGGGGATGTAGGGTTAGGCAACGTGGCTAACTTCGGCAACACCAACTCATATGCAGGTACATCAACGGCTCTATATGCAACCCAAAAGGCTGCCTATGATGCTGCTGCTGCTCCTCGATTGGAAGCCGAACGTAAACGTAAAATAACTCACGGAACAGCAGCCCCTTCTGGTGGTGCTGATGGTGATATTTACCTTCAATATAAATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d9733427aa684253a238afdaf5a608cac6d50785497a16b4790adeafb1a47d0d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5542
Evidence 0,5542
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio anguillarum bacteriophage CHOED of the family Podoviridae, successfully used for phage therapy in aquaculture Romero,J., Gajardo,F., Higuera,G., Castillo,D., Middleboe,M., Garcia,K., Ramirez,C. and Espejo,R. 2014-08-28 — GenBank