Protein

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Genbank accession
YP_009609882.1 [GenBank]
Protein name
lysozyme-like domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAENIVESIIVKLGLDGSQYNREAEKAKSNNDKLNKSVSETDKAVSTVTGTITRFFGILAAATGILRMVDQVQKLNDELYHLERNLGMSASTIKNWQGAAGAMGGSAQGMTESIKSLNMGMNDFVTMGDTTLLPFMNALGVGMVDAQGKLRKTDDVMLDLADSFSKMDREQAFSIASKMGIDEGTFNTLVQGRKEMEKMLEYQSKMYKSSEEELKASRQLAQNRALLGQHWESLKTMMADAIIPLFVKLSEVALGIFEYLQEHEDQVKGVFTAISFTIGAILIPILAKATIAALAFIAPFAPFILVVGALGAAFGLLYDDYKTWAEGGKSLFDWGAFKKYIDDSTLSVDNLKNAFSNLGKDMLNNAIPTLKGYAEILNKLVSGDFKGAALQAWDMLKNYYSRAADFVDDLTGQKQGTLANAVGNLVNPNTPASSAPTIASATSKGGNAILDLIAKGEVGTTGASGYNVAYRGARISAKQMFGKELSQLTIGQVKELQRANLNEQKSRGIPAKRRSSAMGRYQFIYSGFDDYIRAAGLSDKDMFSPENQDAMAMAIISRGKYGLNAVRAGKATPEQFQNNVLAARWASIQKTTGGGVHDAAGFNKATIGNQAVAAALQSTRQGDFIDLTKARQNQATANKANEVQVNVGDINIQTSSNTVAGNVQDAMGAIKDQFYQFRNSFN
Physico‐chemical
properties
protein length:682 AA
molecular weight: 73652,83920 Da
isoelectric point:8,22231
aromaticity:0,07918
hydropathy:-0,19912

Domains

Domains [InterPro]
DC_0145
STR
1–682
DC_0145
Coil
Unmapped
17–44
Coil Coil G3DSA:1.10.530.10
IPR023346
STR
446–592
IPR023346
YP_009609882.1
1 682
Architecture
STR
STR 1-682
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbP2
[NCBI] 		2015804 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009609882.1 [NCBI]
Genbank nucleotide accession
NC_041998 [NCBI]
CDS location
range 15348 -> 17396
strand -
CDS
ATGGCTGAAAATATTGTTGAGTCGATAATTGTAAAGCTTGGGTTAGACGGCTCACAATATAATCGTGAAGCCGAAAAAGCCAAGTCAAATAATGACAAGCTAAATAAGTCTGTCAGTGAAACTGATAAAGCTGTTAGCACTGTAACTGGTACGATTACCAGATTCTTTGGTATCTTGGCTGCTGCTACTGGCATTCTTAGAATGGTTGATCAAGTTCAAAAGCTTAATGACGAGCTTTATCATCTTGAGCGCAATCTAGGAATGTCAGCAAGCACCATTAAGAACTGGCAAGGTGCTGCTGGTGCAATGGGTGGCTCTGCTCAAGGTATGACTGAATCAATCAAATCCTTGAATATGGGAATGAATGATTTTGTCACAATGGGCGATACCACTCTATTGCCATTTATGAATGCTTTGGGTGTCGGCATGGTCGATGCTCAAGGCAAACTAAGAAAAACCGATGATGTAATGTTAGACCTTGCGGATTCATTTTCAAAGATGGACCGTGAGCAAGCATTTTCTATTGCCTCAAAAATGGGAATTGATGAAGGCACATTCAATACGCTTGTGCAAGGGCGTAAAGAAATGGAGAAGATGCTTGAATATCAATCTAAGATGTATAAGTCTTCTGAAGAAGAATTAAAAGCATCTCGTCAATTAGCGCAAAACCGTGCTTTACTTGGTCAGCATTGGGAATCACTTAAAACAATGATGGCAGATGCTATCATCCCGTTATTTGTGAAGCTTAGTGAAGTTGCGCTTGGTATCTTTGAATACTTGCAAGAACATGAGGATCAAGTAAAAGGCGTATTCACAGCAATATCTTTTACTATTGGCGCTATTCTCATCCCAATTCTAGCAAAAGCCACGATTGCAGCCCTAGCATTTATCGCTCCATTTGCTCCATTTATTTTAGTTGTAGGCGCACTAGGTGCTGCGTTTGGTTTGCTCTATGATGACTATAAAACTTGGGCCGAAGGCGGTAAGTCCTTATTTGATTGGGGTGCATTCAAAAAGTATATTGATGATTCGACTTTATCCGTTGATAACTTGAAAAATGCTTTTAGTAATCTCGGCAAAGATATGCTGAATAATGCAATACCAACGCTTAAAGGTTATGCTGAAATTCTTAATAAATTAGTATCTGGCGATTTTAAAGGAGCTGCATTACAAGCTTGGGATATGCTTAAAAACTACTACTCAAGAGCCGCTGATTTTGTTGACGACTTGACTGGTCAAAAACAAGGAACGTTAGCTAATGCCGTTGGTAATCTTGTAAATCCAAACACTCCAGCTTCTTCTGCTCCAACAATTGCAAGCGCAACATCAAAAGGTGGCAATGCTATCTTAGACTTGATTGCAAAAGGTGAGGTTGGGACTACTGGCGCAAGTGGCTACAATGTTGCCTATCGTGGTGCTAGGATTTCGGCTAAACAAATGTTTGGGAAGGAACTATCTCAACTAACGATCGGGCAAGTTAAAGAATTGCAAAGAGCAAATTTAAATGAACAGAAATCTCGCGGTATTCCTGCTAAGCGCCGATCTTCGGCAATGGGTCGTTATCAGTTTATTTATTCTGGCTTTGATGACTATATCCGCGCTGCTGGATTAAGCGACAAGGATATGTTTAGCCCTGAAAACCAAGATGCTATGGCGATGGCAATTATCAGTAGAGGTAAATATGGCTTGAATGCTGTGCGCGCTGGTAAAGCTACCCCTGAGCAATTCCAGAATAACGTACTTGCAGCTCGTTGGGCTTCTATTCAGAAAACTACTGGTGGCGGCGTTCATGATGCGGCTGGATTTAATAAGGCTACGATTGGAAATCAAGCTGTAGCTGCGGCATTGCAATCCACTCGTCAAGGTGATTTTATTGACTTAACCAAAGCTAGACAAAACCAAGCAACGGCAAACAAGGCTAATGAAGTTCAGGTAAATGTAGGTGATATTAATATTCAGACTTCATCTAATACCGTTGCTGGCAATGTCCAAGATGCAATGGGTGCGATTAAAGACCAATTCTATCAATTCCGAAATTCATTTAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0f6593f112f7c104fb45f18df149ec3918e4e39cff0263767c843b0b31ca597f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Acinetobacter baumannii phage AbP2 Yang,Z., Yin,S., Jiang,B., Huang,G. and Peng,Y. 2012-10 — GenBank