Protein

View in Explore
Genbank accession
QBX32653.1 [GenBank]
Protein name
long tail fiber, proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLGQAFRASSGLDAAGEKVINVAKASKTVMTDGVNVEFFHQYNTIYQYDETRGYDKFHAVIRDRRVYYAKADIASPAGAFDALKWTGLRVDPTWQYVNATVGDGLQLVSGQYITADNRFNNLKFILPTAPIDGDTLVIKDIGGQPGVNDLLFTSINAATIETMGRVVGANFRSTVPFSEYIFVYKAAGNRWQLNINASVVQNHFIAPSTQGFQLQSGMVTWRQTAQGQIRMILPKYANHGDTIATHDIDGLNALNHSTLEVYPNSGHSINETGVNKIESRTSGYGYFVFDASSNTWEVWDGDQRTRIRVTKADTNMLPFEHILVTGDGVPTNSTVVLTLPEDVAIGDRVQVTMDYLRKGQTCTIRVTPNSGEVIVGSKAQMQFQKRSEYPATAGWELVSSVSINADTDYVPYVELMYAKLDPTLVGVVGSEFGWMIGQVCPKVERVDPARRDRLGVAALAAQSEVDKNYEQNPNDETIVTPRTLARKTANETRRGIARIATTAEVNQVTSASYLDDVIVTPRKLNERSATETRRGLAEIATQGEANGSTDDITIVTPKKLHNRIASETLTGILAITKKAGTPGTARNLAGVGVYNRGDHLRAVTPATLDEFVATETAKGAGYIATQAEVDGGSSDSNGPLFVTAERLGARRATETNHGLIEIATQAETNTGTDDTRAITPKKLNDRVATETRTGIAQIATQGDVDTGTDPRRIVTPLKLKNRFNTTSRIDVNSTDGLTRTGTIWDKVSIGIVPATESQRGTLRVATQAEANGSTSDDTMITPKKLDGRKATRSLDGIIRIGTTTEVRAGTLSSVAVCPADLIYMIQTEPTWSGNESRRGSVKTATMESTFVGNNTAGSTQAYTSYANDGLAVSPRGLNYALQNFLPKMATAQNSLSLGGVVANDWIRRTVAQTVTGAMTFTADMTARGVTANSTSVANLKIRDGNLGAIEIGTAGNNVLGSGVLLYAANEAGTTNNWFMYAGGRSSVLGVNEVGFVSAGADGLTGLTKQFSIDRNGDTRTKRHITSDTGNIYLSSTNSRIDMGGLHFASVASGVVDIGSSSRALRLISLDNVVKIGSSDIIHDGNRVAKLDPVYLRRDGGNNQTGKILAAMNGDVKYNTYRNDNRYISSRGNDFVFGNTDTTNGRVCLDSNKNPIVKIGNFEYEIYHKGNKPTAADVGAVDVTGSAANNLTIRDWIKIGNVKIIANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1218 AA
molecular weight: 131310,30440 Da
isoelectric point:6,97906
aromaticity:0,06732
hydropathy:-0,30312

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX32653.1
1 1218
Domain Start End Length (AA) Confidence
N-terminal 1 368 368 0,6679
Central domain 369 817 450 0,1046
C-terminal 818 1218 400 0,6686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-368
Central
369-817
C-terminal
818-1218

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Asfd_1
[NCBI] 		2562462 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32653.1 [NCBI]
Genbank nucleotide accession
MK577502 [NCBI]
CDS location
range 14659 -> 18315
strand +
CDS
ATGTTAGGACAAGCATTTCGCGCATCGAGTGGACTCGATGCTGCCGGTGAAAAAGTAATAAACGTTGCGAAGGCCAGTAAAACAGTCATGACTGACGGGGTCAACGTTGAATTTTTCCACCAATACAATACAATCTATCAATATGACGAAACTCGCGGATACGATAAATTTCATGCTGTTATTCGCGACCGACGTGTTTACTATGCAAAGGCCGATATAGCTTCACCAGCTGGCGCATTTGATGCGCTCAAGTGGACTGGTCTTCGTGTTGACCCAACATGGCAGTATGTAAACGCAACTGTTGGGGATGGCCTGCAACTCGTGTCTGGTCAGTATATCACAGCTGATAACCGTTTCAACAACCTGAAGTTTATTTTGCCAACAGCGCCAATCGATGGTGATACTTTGGTAATCAAGGACATTGGCGGTCAACCTGGTGTAAACGACCTGTTGTTCACATCTATCAATGCCGCGACCATCGAAACCATGGGCCGGGTTGTTGGTGCTAACTTCCGTTCAACTGTCCCGTTCAGTGAGTACATTTTTGTCTATAAAGCAGCCGGTAATCGGTGGCAGCTTAACATAAACGCTTCTGTCGTTCAGAATCACTTTATTGCGCCATCAACGCAGGGTTTCCAGCTCCAATCAGGGATGGTTACATGGCGCCAGACTGCGCAAGGTCAGATTCGCATGATTCTGCCAAAATATGCGAATCATGGTGATACTATTGCAACCCATGACATTGATGGTTTGAACGCCCTGAATCACTCAACCCTTGAGGTTTATCCAAACTCAGGCCATAGTATCAACGAGACTGGTGTCAACAAAATCGAATCACGCACATCCGGGTATGGTTATTTTGTTTTTGACGCATCTTCTAATACATGGGAAGTTTGGGATGGTGATCAGCGCACGCGTATACGCGTAACAAAAGCCGATACCAATATGTTGCCATTTGAGCACATTCTTGTAACTGGTGATGGTGTCCCGACAAACTCCACTGTCGTCCTGACGTTACCAGAAGATGTGGCTATTGGCGACCGGGTGCAAGTCACAATGGACTATTTGCGCAAAGGCCAAACATGTACCATCAGGGTAACTCCAAACTCTGGTGAGGTAATCGTAGGGTCCAAGGCGCAAATGCAATTCCAAAAGCGGTCTGAATATCCTGCAACCGCCGGTTGGGAGCTTGTTTCATCTGTTTCAATCAATGCTGATACCGATTATGTTCCGTATGTCGAATTGATGTATGCAAAATTGGATCCGACATTGGTTGGCGTGGTTGGTTCTGAATTTGGTTGGATGATTGGTCAAGTTTGCCCGAAAGTTGAGCGTGTTGACCCGGCTCGTCGTGATCGTCTCGGTGTTGCAGCTCTTGCAGCTCAATCCGAAGTTGATAAAAACTACGAGCAAAACCCAAACGACGAAACTATTGTCACCCCACGCACTTTAGCCAGGAAAACAGCCAATGAAACCCGCCGAGGTATTGCTCGAATCGCAACTACGGCTGAAGTGAACCAAGTCACGTCTGCATCATATCTGGATGACGTCATTGTGACCCCGCGAAAGTTGAATGAACGTTCAGCTACTGAAACTCGCCGTGGTCTGGCAGAAATTGCCACACAAGGTGAGGCGAATGGATCTACTGACGACATTACAATTGTTACGCCTAAGAAATTACACAACCGAATTGCATCTGAGACCTTGACTGGTATTTTGGCTATTACCAAAAAAGCAGGAACTCCTGGTACAGCACGCAACTTGGCTGGTGTTGGCGTTTACAACAGGGGTGATCATCTCAGAGCAGTCACACCGGCCACCCTGGATGAGTTTGTAGCGACCGAGACAGCCAAGGGTGCTGGTTATATAGCCACACAGGCGGAAGTCGATGGTGGAAGTTCTGACAGCAATGGGCCACTGTTTGTGACAGCAGAGCGACTTGGTGCACGTCGTGCCACTGAGACCAACCATGGTTTGATTGAAATCGCGACTCAAGCGGAAACCAATACTGGTACCGATGACACTCGTGCTATAACACCAAAGAAGTTGAACGACCGTGTTGCCACTGAAACTCGGACAGGTATTGCTCAAATCGCGACTCAGGGTGATGTCGACACAGGTACTGACCCACGACGAATTGTCACCCCGTTGAAATTGAAAAACCGTTTCAACACCACTTCGCGAATTGATGTTAATTCTACTGATGGTTTGACACGAACAGGTACTATTTGGGATAAAGTCTCAATTGGGATTGTTCCCGCTACCGAATCGCAACGTGGTACCTTACGTGTTGCGACACAGGCGGAAGCAAATGGTTCGACCTCCGATGATACCATGATTACCCCAAAGAAACTTGATGGTCGCAAAGCCACTCGCTCTTTGGATGGTATTATTCGCATCGGGACAACAACCGAAGTTCGTGCAGGCACATTGAGTTCTGTTGCAGTCTGCCCGGCTGATTTGATATACATGATTCAAACTGAACCAACTTGGTCTGGAAATGAATCTCGTCGCGGTTCTGTAAAAACTGCCACAATGGAATCAACATTCGTTGGTAATAATACAGCCGGTTCAACACAAGCATATACTTCATATGCCAATGACGGTCTTGCTGTTAGCCCTCGTGGATTGAACTATGCTTTGCAGAATTTCCTTCCTAAAATGGCTACTGCACAAAATTCGCTGTCATTGGGTGGTGTTGTTGCTAATGATTGGATTCGCCGGACAGTTGCCCAAACCGTAACAGGTGCAATGACTTTCACAGCCGATATGACAGCTCGTGGGGTTACCGCTAATAGCACATCGGTTGCTAACCTCAAAATTCGCGATGGCAATTTAGGCGCTATTGAAATCGGAACTGCTGGTAATAACGTACTTGGCTCTGGCGTTCTGCTATACGCGGCCAACGAAGCTGGTACAACCAACAACTGGTTTATGTATGCCGGTGGTCGTTCATCTGTACTTGGTGTAAACGAGGTCGGATTTGTTTCAGCTGGAGCTGATGGGTTAACTGGTTTGACTAAGCAATTCAGTATTGACCGAAACGGGGATACGCGTACCAAACGTCATATTACGTCTGACACCGGTAACATTTATCTTTCAAGTACAAACTCACGTATCGATATGGGTGGTTTGCATTTTGCATCGGTTGCTTCTGGTGTCGTTGATATTGGTTCTTCAAGTCGAGCACTTAGACTGATTTCATTAGACAACGTGGTCAAAATCGGTAGCTCGGATATTATCCACGATGGCAATCGAGTCGCTAAATTGGACCCGGTATATCTCCGCCGTGATGGTGGAAACAATCAGACTGGTAAGATATTGGCTGCAATGAACGGTGATGTGAAATATAACACATATCGCAACGATAACCGTTATATTTCATCTCGTGGCAACGACTTTGTGTTTGGTAATACCGACACTACTAATGGTCGTGTATGCTTGGATTCAAACAAGAACCCAATCGTTAAGATTGGTAATTTTGAGTATGAAATTTATCATAAAGGTAACAAGCCTACTGCGGCAGATGTTGGTGCTGTCGATGTCACTGGTTCAGCTGCAAATAACCTGACTATTCGCGATTGGATCAAAATTGGTAACGTGAAAATCATCGCCAACAACTTGACCAAGACTGTGGAATTTATTTGGGAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eba861f25c9084cd0682395b33e23b2faefef5cf5776c06b1a4eba714c561656
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel lytic T4-like bacteriophage Asfd-1 combating Aeromonas Salmonicida Zhou,Y., Yuan,S. and Ma,Y. 2010-12 — GenBank